Id Trinity | TRINITY_DN48163_c0_g1_i6 |
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Name Transcript | Ll_transcript_509489 |
Sequence | CTGTACTGTCGAGATAAAGGAAAAGAAACAAAAATTAAGGTCAGTGCTTCAAACTTGGGAAAAAACAACATCAACAATGGCATCAAAGCCACGAAAAAGA CTCTCTTCAACACAAACCTCAACCATACCTTCTTCATCTGAAAAAGAAAACAACAAGAACAACAATACACAACAACACAAACCCAACAACAACAACAGTT CTTCTGATTCTCCAATTGCACCTCCCAAATGGGGTCTAATTTTCAAGCTCTCACTTTTCTCTATCCCACCATACTTGTACCTTCTCTTCTACCATTACCC AATCGAACAAGACATTCGAAGATCCGTCCTCATTAACGCTGTTATGAGTCTTGCTGGGTTCTTTCTCACTGTTAAATTGATCCCAGTTGCTTCCAGATAT GTTCTTAAGCGAAACCTCTTTGGTTATGATATTAACAAAAAGGGTACGCCGATGGGAGATGTCAAAGTGCCTGAATCTTTGGGTATAGTTGTTGGCATTG TCTTCTTGGTTGTTGCAATCTTATTTCAATATTTTAACTTCACAGAAGACTCAAATTGGCTAGTTGAGTACAATGCGGCATTAGCATGCATCTGTTTCAT GATGTTACTTGGTTTCGTTGATGATGTCCTTGATGTCCCATGGAGAGTGTGAGCATACAAGTATTTATTATTCGATTCCATATTTTTGCTTCTCCACGGA CGATAGAATTGTTTATTTTGATTTTATGTCAATGCAAAGAGCAGAAAATTATTACTCCCATCAATTGCTGCACTACCTCTGTTAATGGCATATGCTGGAC ATACAACTATAGTTATACCGAAGCCACTTGTCCCACACATCGGGGTAGAGGTTTTGGATCTTGGTAAGCATTCCATACCGTTATGCAAATGATGCTAAAG GAGTCGCTAAATATTGTAAAGAATCACTGTATGACAACTTATTGACAAGGCAGGATGGATTTATAAACTATATATGGGACTATTGGCTGTTTTCTGCACA AATTCAATCAACATACATGCTGGACTAAATGGCCTTGAAGTTGGGCAGACAGTGGTTATCGCATCAGCGGTAAGTATCAAAGCTTGTAAATGTAGGTAGA GTTGAATTTACTCATCGAAAATTATGAATTCTGCTATACAATATTATGCAAATTGGAAATCACTATCTGGGATTGACTACATAGATAATAATACCGTGGG CTTGCAGATCCTGATACACAATATTATGCAAATTGGAGCATCAAGTGATCCTGAATATAAGCTAGCACATGCATTCTCTATTTACTTAGCTCAGCCTTTA CTAGCTACATCTTTGGCTTTACTTTCTTACAACTGGTATCCATCTTCAGTTTTTGTTGGTGACACGTATACCTACTTTGCTGGAATGACTATGGCTGTGA TTGGTATTTTAGGCCATTTTAGGTATATCCTTAATCTGACAAAAGTTTTAAGCTGGCTATCTTCTTTGGGTGTGTTTCAGTGCTATCAAGATTATATACG GGACTTCAGAAATTTTGCACCTCTGGTTTTATTTTTCTGTTCTAAAGGATCAATTTTGGAGATGAAGTATATGGCTAACCACTTTTATAAGTTGAAGCTT GCTAGTAAATGTTTCTTTTGCTGGCATGGCTTGTATTTTTCCATTTATCTAAGAGTACTTTGGATTAATGACTGTGCATCATTTTATAAGAAAACCTACC AACTAGAACTATTGTTTTAATCTTCAATTCTTATCTCTTTTTGTTGAAAAGAAATCACATTTTAGAATAAATTTTGGCTTCTTAATTTTGTTATCTGTGA TGTTTTAAGCAGTTTTTTATTTTAAGTTTAACCATCATCATCTTCTAATCATTTGCAATGTCAACAGAGATTCTGTTGTCCAGTGATAATTATTATATAT ACATATTGGAGGGAGGACACAGAACAAAAATCACTTTGATGTTTGTTTTTAATTAAATTTTATTTGTCTCAAGTTAACATGATGTGGTCCAATTCCGGTG GCTGTATAATGTAGTCAAGGAACTGGTAAGGAGGAAATTAAATCTGCCTTCATAATACAAATATGACATGTGTGACAAAATTGAAAGTTAAAAAATACAT GGAGGGAAAGTACAAACTGGACTTAATATTTGTCAGTCTTAGTTTAGTTTTTCCTTGGCATCATCTACACATTGAAAACTCAAAATCCCTGCTGCTTACA CGGAAACTTGCGGCTTCTATTAAGTATTTACCATGGGCAAATAGGCAAATATGATGCCGAATTTGCAATATTAACCTCCCAATTATACTTCAAATGCATA TAAGGTAGTTTGGGCTGGTAATTTTGCATGAAAAGCTTATATACAGTCAAGGAAACTTCTTTTTCTGTTCTAATCTGTGGATTACATTTTTTCCTGAGGG CTCTTCTTTATGTTCCTATTCCCTTTGACCATTTCTTTCTCCCATAAAATATATAACTGTTGTACTTGAGTAAAGTATAACTACAAAAGAAAAAACTTAA TCTGACTCAAGTTTTATCAAATATTAAAAGGTAAGCATTTAGCAGATGACCTGATTAGCCATCGAGCAGGATAAAAACAGTAGTATAAAGCTTATGTTTG TGCATTTGTATCAGTTCATTCCACTGAGAGCTTGGCATATTAAATTGCATTCTAATAATTTTATTCTCTTTCTATTTTTGCTTCAGTGAAACACTCTTGA TTTTCTTCGTACCTCAAGTTTTGAACTTTCTCTTTTCACTCCCCCAGCTTTCCGGCTATGTTCCATGTCCTCGTCATCGACTGCCAAGGTTTGACCCTGA AACTGGACTACTGACTGGGACAAAGGATGGGACACTCGTTAACCTGTCCTTGAGATTTCTAGGCAGGAAGTCCGAAAAGGCACTTTGTATTTATCTTCTT GGTTTCCAGGTGATTTCGTCTTCCCATTTTTCCCTCTTGCCTGTATTGATGTCTGATTCAAGCAAATCAGTGTAGTTCATGGGTCCAAGTATAACTTCAC AGATAAAAGTGAACATGGCCTCATTTGATTTAGGAATCGTGCTAAGAATTTACCTAAATGGCTAAAGTTGCTCCATCTGTGAGTTAGGTTTTTGAGGGAA AGAAAGGAAAGGGAAAACATGGGAGCTGTAAAATATATTTGTGAGATGGCTCTAAAGCCTTTCCTTGCGCTTCATTCCTTTCTAAAACTCATCTCGCAAA CAAATCGTTAAAGGTCAATTATTTTTTATTTCCTTAATGGCTTAATATTTTAATGTGTATGTAATTGATTTGACATGCTTCATGAGGACTTGCATTCTAA TTTCAACTAACTGTCAAACACACACATATATTTTAAAATAAATAAGGCCTACCATAAACATTATTATGAGATTTGGGTACTGCATATTTGCACATTTTAA ACAAGACAATTATTACAAATAACATTTTTCAAGCAATATATCATTTTACGTAATCAAATATCCCCCTACCCACAATAAAATGACATGTCACTTGTAAGCT AATTTTTATAACAAAGTATCACTTTGTGACACATTTTACTTTTTTTTATGCCATAGGAGGATATATATTTTCATTTTAACCTATAATTTTGATGCCGATA CTTTTACTGGATGGATACCATTGCAGTCGAAATGTTGAAATCTTTGCATATATTTTATCTTCTTTTTGGCAGGCCATTGCATGCTGTCTCTGTTTCTTGC TGAGGCATTTCCTTGCTGGGTGGTACAAATGAAATCACCAAACTGAAAACAAATATAGATGTAAACCTCCCTCGAGGCTGAATCTGTTGTATTGATATTT TTGTAGAAAAACTGTCTAACATTTTCCTCTCGAGGCCTTGAATGTCTAACATTTTTGCATGCCACCCTTTTAACACGACATTCTTTTTAATTTTGTCACT ACTGGAGTTAATATAAGTTAACTGGTATTAAAATTAGAGAATAAAGTATTTCCTTGTACTAGGAGATAACTTATCTCCTTTACTCTATTCACTGCATGAT ATATGTCTTGTTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_158652; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509489
Blastp | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase from Dictyostelium with 52.78% of identity |
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Blastx | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase from Dictyostelium with 34.92% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426506.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |