Ll_transcript_509643

• Id Trinity: TRINITY_DN48169_c1_g1_i2
• Name Transcript: Ll_transcript_509643
• Sequence: AGCATCGTTGCTATCTGTTACATCACAAGTCCTTTCAATTCGTGTGTTTTGCTTCATTTTCGCTTCTTTCACTCTTCTTTTGTTTTTTCTTCTCTCAACA CTAAACATGTGACTTTCTCTCACACTTTCACACACAAACAAAAAGTGGTTGTTCCATGTTAACATTCTAAGCAACAACAAAAACAAACCAAAAAGGTGGT TTCTTTTTTCACTTCCAAATTCCAAAAGCAAAAGAAGCTTCTCACTTATGCCTTCTTTGGTAAAGGGTTTTCAGTTTTCACCCCTTTCTGCTATAATCTC ATGGAGAAGTAGAAGACCAATGCTTATATTTCAAGCTCAAAGTTTTGATGGTGTAAGAAACTCAACTATGAATGTAAATGATAGAGGTTCTTGTTATGTG AATGTAGAAGATAAGATTGAAGAAGATAAGATTGTAAATAGTAATATTTTGGAGGAAGAAGAAAAAATAAGAGCAGTTTGGAATGATGGGTATGGGAGTA GAAGTGTAGAAGATTACTTTGATGCAGCAAAAGAGATGAGCAAGTTTAGTGATTGTGGTCCACCAAGGTGGATTTGTCCTCTTGATTGTGCTGGCCCTTT CAAAAATTCTCCCACTCTTCTCTTTCTACCTGGGATAGATGGTACAGGATTGGGCCTCACTTTGCACCATAAAGCTCTTGGAAAGGTTTTCAAAGTTCAT TGCTTGCATATTCCTGCTCATGATAGAACACCATTTGAAGGACTGGTTAAACTTGTTGAAGAAGCTATTAAGCTTGAGTATGTTTTGTCTCCAAATAAGC CAATTTATATGGTAGGTGAGTCCTTAGGTGGATGCCTAGCCCTTGCTGTAGCTGCGCGTAATCCAACTATTGATCTGGTACTGATATTAGTAAATCCGGC TACATCCTTTGGCAGATCTCAGCTGCAGCCTTTGCTTCCTATCTTGGAGGTTATGCCTGATGAACTGCATGCAACTGTTTCCTTTCTTCTGGGTTTTATT GTAGGTGATCCAGTAAAGATGGCATCAGTCAATGTTGGGAATAGCCTTCCTCCTACTGAGAAAGTTGAACAACTGTCAAACAACCTTACTGCATTGCTAA CATATCTGCCTGAATTGGCTGATATTATACCAAGGGACACTCTTCTTTGGAAGCTGAAACTTCTTAAATCGGCTGCCTCATATGCTAATTCGCGTCTCCA TGCTGTCAAAGCTGAAGTTCTTGTTCTTGCTAGGTTCTCCCTCACTCTAGATTTGATGGCTCTCATAGAGTCATAATAATAGTGTGCATTCCCATGAGTC TATGTTTGTGTTTTTCTGTTGGCTGGTATTTTTTGTTGCTCAAAATACTTCAAAAAGTAGCTCCTAATTGACTCTCAAATCTAGAATAGTACATATAAAA TATCACTTGAATTCTGCCAAAACAACTTATAATAGTACATATAAAATATCACTTGAATAGTAGGTCAATAATATTCTATACTTATTTTTCATGCAAACAA TAATATGTTAGAGGTTAAGGAATGGTTTATTTTTCTAAGATCTCTTTTGCTTAATGTGTTTGTTGCATTGTTAAGAGTCAACTGTTTTATGTAGGACTAC AACATTTACTCCAATTTTCAGACTCATGTGTTTATAAAACCTGCATAAGTTACTTGTAAGTTTTACATTCTAGTGGCAAGGATAAAATGCTTCCAAGTGC AGATGAAGCTCAAAGACTTGGGGGCTTATTGCAAAACTGCAAAGTTCGCAACTTTAGGAACAGTGGACACACCATTTTATTGGAAGATGGTATTGGTCTG CTGACAATCATCAAGGCGACTAGCATGTACCGTCAGTCACGGAGGCTTGATTTGGTCCGGGATTTCATTCCTCCCAGCATGACAGAATTCAGATATATAA TGGATGAAGTAGTTGGATTGTTCCGTTCTCTTATCGGATCAGTAATGTTCTCAACATTGGAGGATGGAACAATTGTGAAAGGTCTCTCTGGTGTTCCGGA CGAAGGTCCGGTCTTATTGGTTGGTTATCACATGTTGATGGGTGTAGAGCTAACCTCACTTATGGATGAATTCTTAAGCGAGAAGGGTATTATGGTTCGC GGAATAGCACATCCTGAGATGTTTACGGGGAGAGAGGAGAGTTTATCTTCTGAGTTTCCTTTGATGGATTGGGTGAAGATATTTGGTGGGGTGCCTGTTT CACCATCCAATCTTTTTAGATTGCTCTCAGCAAAATCACATGTCCTGCTATATCCCGGTGGTGTTCGCGAGGCTCTCCATTTGAAGGGGGAAGAGTACAA GTTGGTTTGGCCTGATCATCCTGAATTTGTGAGAATGGCAGCAAGATTTGGTGCCACAATTGTGCCATTTGGAGCAGTAGGTGAAGATGATGTTGCTAAA ATAATTCTTGATTACAACGACTTAATCAAGATCCCTATAGTCAACAACCACATCAAAAATTGGAGTCTTGATGCTAATAAGTTTAGAGATGAGACAAGTG GAGAGGTAGCAAACACAAATCTCTATCTTCCAGTGGTTCAACCCAAACTACCAGGTAGATTTTACTATATGTTTGGGAAGCCCATAAGAACAAAAGGCAT GGAAAATATACTGAAGAACAAAGAAGCTGCTAATAAATTATACCTTCAGATTAAGTCTCAAGTAAAACACAATATAGATTACTTGATCAACAAGAGAGAG GAGGATCCATACAGGAACTTGATCAATAGGAAAATCTATGAGGCACTTCATCCTTCTAAAAATGATCAAACTCCAACATTTAAGCCTTGAAAATAATGGT TCATATGCTACATTATTCTTGATCTTATATGTAATCATGTTTAATAGGATACTTGTATACATACATACATACATTATAATAAATTATTTATATGACTAAA CTATTATTAAT
• Tissue: pods
• Gene name: LI_gene_158687;
• Additional information: details;

Expression of Ll_transcript_509643

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 2.1
• PS2: 0.3
• PS3: 1
• PW1: 0.9
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509643

• Blastp: Acyltransferase-like protein At1g54570, chloroplastic from Arabidopsis with 57.41% of identity
• Blastx: Acyltransferase-like protein At1g54570, chloroplastic from Arabidopsis with 58.4% of identity
• Eggnog: Acyltransferase(COG0204)
• Kegg: Link to kegg annotations (AT1G54570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440518.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;