Ll_transcript_508539

Id TrinityTRINITY_DN48171_c1_g2_i12
Name TranscriptLl_transcript_508539
SequenceAGCTGAGCGCTAAAAGAAGGACACAATAGTCTCTTAATAGTTAATAGTGATATGAAACTATTGTTGTGAATTGTGATAAGTATAAACTTATAATAAATGA ATTGATTTATGAGTTGGCAAATGAAAGAAGAGACATGCAAAATACGACAGAACAACATAAGATCTTGTTTCAGTAACCACTCAGAAAATATCATTTGGCA CCGTTGGTTGTGTCTTTTACTCACATCCACAATGAAAGCCTATCTCACACTTCCAAACTCAACTAAGTTATGGATTTCTCTTTGAAACTCAACTCCAAAA CACTTTTTCCTCTCACAACTCCTTCTTTCAACCTTAACCCTTTTCTTCTCACATCATTTCCTCATCATCATCAATTAACTCTTGCACTTTCTCATTCATC TTCACAATGTAAGGCAGGTTGGGGTGCTTGTTGCATCAATGCAAGTGCAGGGAGGAGACAGCAGAAGAAGGGGCCAAGTGCAAGGCCCAAAGGCCCTGCT TCTAAGGGTTTTGTCTCGAAATCTTCTATTGGAACAAGCAACCAGCAAAAAGATAAGAAGAATGCTAGAGTGAAAGGGGATCCATTGACTCCATTAGTCA GTGAGATTTCGGGGGATGATAATAAACAAACACTTGAAGTGAATACTGATGCTGATGATGAAGGAGGAGGAGGAGGAGGAGAAGGGGCGGTTGAACCTTC CCATCTAGAAAACTTTGAAGTTGTAGATAGAACTGATGAAGTTGCTGGGGAGTTGGGTGGATTTTCGTTATCGGATGAGTCATTAGCTGTTGTTGCTAAG AGCAATCAAGGTGGGGAAAATGAAAACGTGTCTGTAATTGATGAGGATGTTCTCATATTACAGCAGGAGCAAATTCCTTACATTGGGGATTTTGGGAATG TTAAGAAGTCAGATGATAGGACATTAGGCTACGTAGAAATTAGTGAACACGTTCAAGAAACAAAGACTGTTTCTGATGATGAAATAGCTGAGGAATCCAT CACAGAAACAAGTACTGGCGCTGATGATAAAATAAACGAGGAAGCTTCTCGGCTGTTGGAGTTGGAAGCAATTTCGCGCAAGCAGGAAATAGAGAGGATT GCATATGAGAACCTTTCACAAGAAACCAAGCTGTTTGTATATCCTCCTGTGGTTAAACCTGATCAAGACATAGAAGTTTTCCTTAACAAGAGTCTTTCAA CACTAGCTAATGAGTCAGACATTCTGATCATGGGAGCATTTAACGATTGGAGGTGGAAATCTTTTACCTTTCGGTTAAATAAAGCGAATCTCAAGGGTGA TTGGTGGTCTTGCCAAGTACATGTGCCAAGAGAAGCTTATAAAGTAGATTTTGTGTTCTTCAACGGCCAAGATGTCTATGACAATAATGACCGAAAAGAC TTCTACATACCTGTTGAGGGGGGAATGGATGAATTAGCATTTGCAGATTTCTTGCTTGAGGAGAAACGTAAAGAATTAGTAAAACTTGCGAAGGAGCAAG CTGAAAAGGAAAGACAGGCTGAAGAGCAAAGGCGGATGGAAGAGGACAAAGCTGCAAGGGAAGCAGACAGGTCACAGGCGAGGGTGGAGATTGAGAGAAG GCGAGAATTGTTGCCGCAATTGTTGAAAAATGCTGTAAATTCCCTTGATAATATTTGGTATATTGAGCCTAGTGAATTTAATGACACTGACTTGGTCAGA TTATATTACAACAGAAGCTCAGGTCCTCTTGCACATGCTAAGGAAATATGGATTCATGGAGGGCACAATCATTGGATCGACGGATTATCAATTATCGAAA GGCTTGTCAAATCTGTTGTAAAAGATGGTGATTGGTGGTATGCTGATGTTATTGTGCCTCACAAAGCTATTGTCATGGATTGGGTTTTTGCTGATGGTCC ACCCGAAAGTGCAGCCGTGTATGATAACAATCGTAATCAAGACTTCCATGCTATTGTCACAATGGTCATATCTGAACAGTATTGGGCTGAGGAAGAGCAG CTGATATACAGAAAACTCCAGGAGGAGAGGAAGTTAAGAGAAGAAGCTATGCGCGTAAAGGCTGAAAAAACAGCACAGATGAAAGCCGAAACAAAGGAAA GAACTTTGAAACGTTTTTTGCTTTCTCAAAAGCATATTGTCTTCACTGAGCCTCTTGATGTCCAAGCAGGGAGCACAGCGACGGTATTTTATAACCCCTC CAATACAAATCTGAATGGAAAACCAGAGGTTTGGTTTAGGGGTTCATTTAACCGATGGTCTCACAGTAACGGTCCTTTGCCACCTCAGAGAATGTTGCCT GCAGACAATGGTACCCACGTCAAATCCTCTGTTAAGGTCCCTTTAGATGCATACATGATGGACTTTGTATTCTCTGAGAAGGAAGATGGTGGAGAATTCG ATAACAAATTTGGAATGGATTATCACATACCTGTTTTTGGAGGTATCGTAAAGGAACCACCTCTGCATGTCATCCATATTTCTGTTGAGATGGCCCCAAT TGCAAAGGTTGGAGGTCTTGGTGATGTTGTTACTAGTCTATCCCGGGCTGTTCAGGATTTAAATCACAATGTTGACATTCTTCTTCCGAAGTATGATTGT TTGAACCTCAGCCATGTGAAGGACTTTCACTATCACAATAACTTTTTCTGGGGTGGGACTGAAATAAAAGTATGGCGAGGAAAGGTTGAAGGCCTCTCTG TCTACTTTTTGGAGCCTCAAAATGGATTCTTTCATGTCGGCTGTGTATATGGTCGTGCGAATGATGCAGAGAGATTTGGTTTTTTTTGTCATGCTGCTCT TGAATTTCTACTCCAAAATGGATTTCACCCTGATATCATCCACTGCCATGATTGGTCGAGTGCTCCAGTTGCATGGCTATTTAAAGAAAACTATGTTCAT TATGGTCTTAGCAAAGCACAAGTTGTTTTCACAATTCACAACCTTGACTTTGGAGCCAACTTCATTGCAAAAGCTATGCAACACTCGGACAAGGCTACTA CTGTCTCCCCCACTTATTCAAGGGAGGTTGCAGGACATCCTGCAGTAGCTCCTCATCTTCACAAGTTCCATGGTATAATAAATGGAATTGACCCAGATAT ATGGGACCCGTATAATGATAATTGCATTCCTGTAAGTAGACATTTACAAAGATCTTTCTTTCTCCTTTCTTATATATTTGCAAGAGGATGAGCCTCGGTG GAATGGTAAGGGAGCTTGCCCCGTGACCTGGAGGTCATGGGTTCAATTCTTGGAAACAGCCTATCCCTTTATAAGGGTAAGGTTGCATACATTAAGTCCC AGTGCCGTGACTGCTTCATAACCTATGCGTACATATTAAAGTTGGCCACCTCGGGTGGGAACAGTGCTCAGTGACTGGCTCCATTCTATATTAGTTCTTG TGCATTCCTTAAAATTAGTGCAACTAGTGAAGAAAATTTGCTTCATCTTTAATTTGCTTCAACCTTACTATTCCAATATCGCATTATCTTAGGTACCGTA CACATCAGACAATGTTGTTGAAGGAAAAAGAGCTTCCAAGGAAGCCTTGCAACTAAGGCTTGGTTTGGAAAAGGCTAATCTTCCTTTGGTAGGAATTATT ACTCGATTGACTCATCAAAAAGGAATTCATCTCATCAAGCATGCCATATGGCGCACCCTAGAACGTGGTGGACAGATTGTATTACTGGGTTCAGCTCCAG ATCCTAGAATCCAAAATGATTTTGTGAGTTTGGCCAATCAACTGCATTCTACTCATAACGCTCGTGCTAGACTTTGCCTTTCATATGATGAGCCTCTTTC ACACTTGATATATGCTGGTGCTGATTTCATTCTAGTTCCTTCTATTTTTGAGCCATGTGGACTCACTCAACTCACAGCAATGAGATATGGTTCAATACCT GTTGTTCGAAAAACAGGAGGACTTTACGACACGGTATTTGATGTCGATCATGATAAGGATAGAGCACAAGCAGAAGGTCTTGCGCCAAATGGATTTGGTT TTGATGGAGCTGATGCTGGAGGTGTTGACTATGCTCTCAATAGGTGAGTTATGTACTATATAATAAGCAGGTAGTTATGTCTGAACATGAAGAAAAAAAC CAATTTGCCAACAGCAAAACTGCGGAATTACGTAACAGCCGGCACAAGTATATAGAAGTTAAACCAATATTTAGTATTGGTATGGTGGATTTTAAAGTTT CTCTAGCCTTAGCTTTTAAGTCAAAAACTCCTTTCACAATTATATATATATCAAGACTCGGCCAATTAGAGGTCATAATCCTCAAGAGTGCTAGTGGCAT GTCCTTGATCTATTGCACTTATATGATTGATATTTGGCACTTTTCTCTCTCTTTATTATCATATTTTGGTAAAATTGTTTTACGGAGTGACCGAACATAT TGTATATTTGGAATACATGGTCCCAAAAACAATCATCGTTTGTTGGAAATCTACCTTGAAATTTTCATGACGAAAGAAAGAAGGGTCGGAAGTGGACAAG TGGTTATGGCATGGCCATAGGAAACCGGAAGCATCATGCATGTCTAAAACTTTTGACACAAAACTATTGCATTGTCTCGCTTGCTCGTGTTAACACATTG CCTCACACTCCCGCACTCGCACCCTAGGCCTGTCAGTGTTTGTTATTATTGAAGTGTTTCATTTTTTCAGGGCAATATCGGCATGGTACGAAGGCCGCGA TTGGTTTAACAGTTTATGCAAGAAGGTGATGGAGCAAGATTGGTCTTGGAACCGTCCTGCACTAGACTATTTGGAACTATACCATGCAGCACGCAAATCA CTATGAGATTGCAATGCAAAATTAAGATTCATTCCATGTTTGCACAGCAGTAGTCTAAAAATATATAAAGTTGCATATATAGTGAAAAACAATACACATC AGTTTGTAGAAACTAGACTCAATTGGGTCATTATTTTGTTGCTGCTTAGTAAATAATAGTATAAGGGTACATGTTTAGTATATGCTAAGATATGTTTTCT TGAAATAGCTGAACTTGTGAAATGCATATATTGCAGAATTGATGACATAAATGTGTAATGCAAATTCTTCATTTGCTTTACACAAATTATCATGGCCTAT TTCTTTTTTTAACCATGAAAAATGTGTAAATTGTTACACCTTTAATTCATAAATTGAATTTTCTTTTAGAATTATCCTTAAAAAA BLAST
Tissuepods
Gene nameLI_gene_158718; 
Additional informationdetails; 

Expression of Ll_transcript_508539

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_508539
BlastpSoluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 57.49% of identity
BlastxSoluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 71.18% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439823.1)
PfamStarch/carbohydrate-binding module (family 53) (PF16760.4)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;