Ll_transcript_508520

• Id Trinity: TRINITY_DN48171_c1_g2_i5
• Name Transcript: Ll_transcript_508520
• Sequence: GAATGATGCAGAGAGATTTGGTTTTTTTTGTCATGCTGCTCTTGAATTTCTACTCCAAAATGGATTTCACCCTGTAAGACATCATTTAGCTGTTCTTATT CTTTTATTTGATGCTGTTAGTTTTCTACATTTTAAGAAAAGCTTCCTTTCCTGATGTAAAAGTGGGACTGAATTGTCAATTGATTTCAAGCTAAATCAAC ATTTTCTCTCATTCCATTGGACCCAAAAACATGATATGCATGAAATTGTTAGTTTGAGAGAGAATAGTCAGAAGTTATAACTTATAACAGTGTCATGAAG TTTTTGCTACTATTTTGACACATTTGCTACATAGATTTTGTTGAGTCCTACATTGTTAATTTATGCATGCATATGCATGATTGTAACCAAACATCCTATA CATAATATGACCAAAAACATTACATGAAAAACAGCTGCTTTCAGAATGTCATTCTAAATATGCAAGTATCAGAAACCACCTTCCCAAGCGATCAACTTTT ATACTGTTATCAGGGGTGTTTTTCTTTCGGATATAATTAACATACCTTTTCCATAACTTTACATGTGACCTCAGGTTTAATTAATTGTCTCCTAGGATGT AATATAATTTAATTAGTTGTTTTAGTGACCATGAGGTCACGGGTTTAAATCTTGGAAACAACCTCTCCTCTTGCGAGGGTAAGACTATGTATATCTACCC TACTCAGACCCCATTAAGTGTAAGCCTCGTGCACATAGTTGCCATTTTTTCCTCATAGGATGTATTTATTGTAATTGGCTATTAACAATGGTCAGGATAT CATCCACTGCCATGATTGGTCGAGTGCTCCAGTTGCATGGCTATTTAAAGAAAACTATGTTCATTATGGTCTTAGCAAAGCACAAGTTGTTTTCACAATT CACAACCTTGACTTTGGAGCCAACTTCATTGCAAAAGCTATGCAACACTCGGACAAGGCTACTACTGTCTCCCCCACTTATTCAAGGGAGGTTGCAGGAC ATCCTGCAGTAGCTCCTCATCTTCACAAGTTCCATGGTATAATAAATGGAATTGACCCAGATATATGGGACCCGTATAATGATAATTGCATTCCTGTACC GTACACATCAGACAATGTTGTTGAAGGAAAAAGAGCTTCCAAGGAAGCCTTGCAACTAAGGCTTGGTTTGGAAAAGGCTAATCTTCCTTTGGTAGGAATT ATTACTCGATTGACTCATCAAAAAGGAATTCATCTCATCAAGCATGCCATATGGCGCACCCTAGAACGTGGTGGACAGATTGTATTACTGGGTTCAGCTC CAGATCCTAGAATCCAAAATGATTTTGTGAGTTTGGCCAATCAACTGCATTCTACTCATAACGCTCGTGCTAGACTTTGCCTTTCATATGATGAGCCTCT TTCACACTTGATATATGCTGGTGCTGATTTCATTCTAGTTCCTTCTATTTTTGAGCCATGTGGACTCACTCAACTCACAGCAATGAGATATGGTTCAATA CCTGTTGTTCGAAAAACAGGAGGACTTTACGACACGGTATTTGATGTCGATCATGATAAGGATAGAGCACAAGCAGAAGGTCTTGCGCCAAATGGATTTG GTTTTGATGGAGCTGATGCTGGAGGTGTTGACTATGCTCTCAATAGGGCAATATCGGCATGGTACGAAGGCCGCGATTGGTTTAACAGTTTATGCAAGAA GGTGATGGAGCAAGATTGGTCTTGGAACCGTCCTGCACTAGACTATTTGGAACTATACCATGCAGCACGCAAATCACTATGAGATTGCAATGCAAAATTA AGATTCATTCCATGTTTGCACAGCAGTAGTCTAAAAATATATAAAGTTGCATATATAGTGAAAAACAATACACATCAGTTTGTAGAAACTAGACTCAATT GGGTCATTATTTTGTTGCTGCTTAGTAAATAATAGTATAAGGGTACATGTTTAGTATATGCTAAGATATGTTTTCTTGAAATAGCTGAACTTGTGAAATG CATATATTGCAGAATTGATGACATAAATGTGTAATGCAAATTCTTCATTTGCTTTACACAAATTATCATGGCCTATTTCTTTTTTTAACCATGAAAAATG TGTAAATTGTTACACCTTTAATTCATAAATTGAATTTTCTTTTAGAATTATCCTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_158718;
• Additional information: details;

Expression of Ll_transcript_508520

FPKM

• PAB: 3.2
• PNAB: 1.5
• PS1: 0.6
• PS2: 0.2
• PS3: 1.8
• PW1: 0.2
• PW2: 2.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508520

• Blastp: Soluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 86.33% of identity
• Blastx: Soluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 82.22% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439824.1)
• Pfam: Glycosyl transferases group 1 (PF00534.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;