Ll_transcript_508528

• Id Trinity: TRINITY_DN48171_c1_g2_i9
• Name Transcript: Ll_transcript_508528
• Sequence: AGCTGAGCGCTAAAAGAAGGACACAATAGTCTCTTAATAGTTAATAGTGATATGAAACTATTGTTGTGAATTGTGATAAGTATAAACTTATAATAAATGA ATTGATTTATGAGTTGGCAAATGAAAGAAGAGACATGCAAAATACGACAGAACAACATAAGATCTTGTTTCAGTAACCACTCAGAAAATATCATTTGGCA CCGTTGGTTGTGTCTTTTACTCACATCCACAATGAAAGCCTATCTCACACTTCCAAACTCAACTAAGTTATGGATTTCTCTTTGAAACTCAACTCCAAAA CACTTTTTCCTCTCACAACTCCTTCTTTCAACCTTAACCCTTTTCTTCTCACATCATTTCCTCATCATCATCAATTAACTCTTGCACTTTCTCATTCATC TTCACAATGTAAGGCAGGTTGGGGTGCTTGTTGCATCAATGCAAGTGCAGGGAGGAGACAGCAGAAGAAGGGGCCAAGTGCAAGGCCCAAAGGCCCTGCT TCTAAGGGTTTTGTCTCGAAATCTTCTATTGGAACAAGCAACCAGCAAAAAGATAAGAAGAATGCTAGAGTGAAAGGGGATCCATTGACTCCATTAGTCA GTGAGATTTCGGGGGATGATAATAAACAAACACTTGAAGTGAATACTGATGCTGATGATGAAGGAGGAGGAGGAGGAGGAGAAGGGGCGGTTGAACCTTC CCATCTAGAAAACTTTGAAGTTGTAGATAGAACTGATGAAGTTGCTGGGGAGTTGGGTGGATTTTCGTTATCGGATGAGTCATTAGCTGTTGTTGCTAAG AGCAATCAAGGTGGGGAAAATGAAAACGTGTCTGTAATTGATGAGGATGTTCTCATATTACAGCAGGAGCAAATTCCTTACATTGGGGATTTTGGGAATG TTAAGAAGTCAGATGATAGGACATTAGGCTACGTAGAAATTAGTGAACACGTTCAAGAAACAAAGACTGTTTCTGATGATGAAATAGCTGAGGAATCCAT CACAGAAACAAGTACTGGCGCTGATGATAAAATAAACGAGGAAGCTTCTCGGCTGTTGGAGTTGGAAGCAATTTCGCGCAAGCAGGAAATAGAGAGGATT GCATATGAGAACCTTTCACAAGAAACCAAGCTGTTTGTATATCCTCCTGTGGTTAAACCTGATCAAGACATAGAAGTTTTCCTTAACAAGAGTCTTTCAA CACTAGCTAATGAGTCAGACATTCTGATCATGGGAGCATTTAACGATTGGAGGTGGAAATCTTTTACCTTTCGGTTAAATAAAGCGAATCTCAAGGGTGA TTGGTGGTCTTGCCAAGTACATGTGCCAAGAGAAGCTTATAAAGTAGATTTTGTGTTCTTCAACGGCCAAGATGTCTATGACAATAATGACCGAAAAGAC TTCTACATACCTGTTGAGGGGGGAATGGATGAATTAGCATTTGCAGATTTCTTGCTTGAGGAGAAACGTAAAGAATTAGTAAAACTTGCGAAGGAGCAAG CTGAAAAGGAAAGACAGGCTGAAGAGCAAAGGCGGATGGAAGAGGACAAAGCTGCAAGGGAAGCAGACAGGTCACAGGCGAGGGTGGAGATTGAGAGAAG GCGAGAATTGTTGCCGCAATTGTTGAAAAATGCTGTAAATTCCCTTGATAATATTTGGTATATTGAGCCTAGTGAATTTAATGACACTGACTTGGTCAGA TTATATTACAACAGAAGCTCAGGTCCTCTTGCACATGCTAAGGAAATATGGATTCATGGAGGGCACAATCATTGGATCGACGGATTATCAATTATCGAAA GGCTTGTCAAATCTGTTGTAAAAGATGGTGATTGGTGGTATGCTGATGTTATTGTGCCTCACAAAGCTATTGTCATGGATTGGGTTTTTGCTGATGGTCC ACCCGAAAGTGCAGCCGTGTATGATAACAATCGTAATCAAGACTTCCATGCTATTGTCACAATGGTCATATCTGAACAGTATTGGGCTGAGGAAGAGCAG CTGATATACAGAAAACTCCAGGAGGAGAGGAAGTTAAGAGAAGAAGCTATGCGCGTAAAGGCTGAAAAAACAGCACAGATGAAAGCCGAAACAAAGGAAA GAACTTTGAAACGTTTTTTGCTTTCTCAAAAGCATATTGTCTTCACTGAGCCTCTTGATGTCCAAGCAGGGAGCACAGCGACGGTATTTTATAACCCCTC CAATACAAATCTGAATGGAAAACCAGAGGTTTGGTTTAGGGGTTCATTTAACCGATGGTCTCACAGTAACGGTCCTTTGCCACCTCAGAGAATGTTGCCT GCAGACAATGGTACCCACGTCAAATCCTCTGGTGAGTCTCTCCCTTAGTTTATATCTGTAAGACGATTTGGACCTAGTGTTTCCGCCAATGTTTTAAAAA TTGAGCCAGAGATTGACCCATTGAGACCTCCAGGTCATGGTTTGATTCGTTCGACCAACTAACTGAACTGTAACCGAGGCTTATACCTTTCAAATCTCTC TGCATCTTACCACTCATTCTGTGGTGTGCAGGTTTATGACAAGTAGTGTCACTTAAGGTTGTTTTCAGATTCGATGTTCACAGATCTTGTAGAATAGATA ACGTTTTTCAAAATGAGCAACTCTAATACTTTTGCAAATTTGGTCGTCTTCAACTTGATTTTGTGTAATCACTGTTCTCTCGAGGAAAAAACAAACATTT GGCCCCGAAGAAGTTCAATCGTTTTTGTGTTTCTGCAGTTAAGGTCCCTTTAGATGCATA
• Tissue: pods
• Gene name: LI_gene_158718;
• Additional information: details;

Expression of Ll_transcript_508528

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.2
• PS3: 0.1
• PW1: 0.1
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508528

• Blastp: Soluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 48.09% of identity
• Blastx: Soluble starch synthase 3, chloroplastic/amyloplastic from Solanum with 64.79% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439823.1)
• Pfam: Starch/carbohydrate-binding module (family 53) (PF16760.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;