Id Trinity | TRINITY_DN48174_c2_g1_i1 |
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Name Transcript | Ll_transcript_508697 |
Sequence | ATTTTTAATAATAAAAAAGAAGCAATTTCGTTCTAACTTGAATCTCTCAAGCCTCAACTGATCTAACGCCCACAGCTTTAAATTCATATAAGAACGATCT AAGAGAGAGAAAGAGTGTAAAAGGCCACAAATTTTGTAGAAGTAGATAACCATAATAATTTCAATTCAAATTTCCCAAAAGAAATAACAACAAAAAGAGA AAAAAGGAAGAAAAATGAAGTTCTTACCGGGAAGTGAATCTTATGTGTTTGGTTGTTCATAGCATTTGATCTCTTATCTTCCCCTTCTCCATTGGATCTT TATCTTTTCTTGCTCTTCTAATCTTTTTCTTTCTCCATAGCATTTTTCCTTCTTTTTTTTATCCATTTTCTTGAAGAGCTTCAAATTCTATTGAAGCAAT TGAAGTAGAAAGATCATATTTTGAGCCTCACCCACAATCACTCGCTTCAAAATCAATTCTGGGTCGATTTTGCTTTTTTCAAAAGCCTCATAGTGTGGTT CATTTCAGTTTTATGGTGATGAAGCTGCAAGGGTTATGTAGGAGTGAAATGGAGATTAGAAAAGAGAGTGTTCAGGTTAGGTGTGATAAGCTTCAGTCTC CAATGATTCAAAGGAATCGATTGCGGGTTTGGTTCGTTAGAGTGTGTTTAAGCATTGTGCTTTGGACGTGTCTTGCACAGCTAGTGACACTAAGTGAACT GTGGCATTCACATTTCATTTCCGGGATTACAAGTAGAATATATCACACAACACTACATCCTCTCGAAGTCGAAAATGGAGTCGTTCAAGCTCCTCCTCCT TTCCTTCCTCCAAGAAGGTATACTAGTAATGGCTTTCTAAGAGTATCCTGCAATGGTGGTTTGAATCAAATGCGGGCAGCGATTTGTGACATGGTGACGA TTGCTCGGCTTTTGAATCTCACATTAGTCGTTCCAGAGCTTGATAAAAAATCCTTTTGGGCAGATCCTAGTGATTTTGAGGACATTTTTGATGTGAGGCA TTTCATTGATTCTCTAAGAGATGAAGTTCGAATAGTGAAAAGAGTGCCCAAAAGGTTTCTTTGGAAAAATGGATCCTCCGCCCTGGATATGCCTCCTGTT AGTTGGTCAAACGAAAAATATTACTTGGAGCAGATTCTGCCACTTTTTAGCAAGTATAAGGTGGTACACTTCAACAAAACAGATGCACGTCTAGCAAACA ATGGTCTCCCATTTGATCTTCAGAAACTTAGGTGTCGTGTTAATTACCAGGCACTTAAATTCACTCCTGAAATTGAGAATTTAGGGCAAAAATTGATTCA GATACTTCATGAAAAGGGACCTTTTGTGGCATTGCATTTGAGATATGAAATGGACATGTTGGCTTTCTCAGGTTGTACTCGTGGTTGCACTAATGAAGAA GCTGAGGAGCTCAAACAGATGAGGTATGCATTCCCTTGGTGGAGAGAAAAGGAGATAGTGTCTGAAGAGAGGAGATCACAAGGTCTCTGTCCTTTGACAC CAGAGGAGACAGCCTTAATTTTGAAAGCCTTAGCTTTTGATAGAGAGACACAGATCTATATTGCATCTGGTGAGATTTATGGCGGTGAACGTAGACTTGC AGAACTGAGAGCTGCGTTTCCAAGAATTGCGAAAAAAGAAACATTACTTGTTAATGATGAGTTGCAGCAGTTCCAGAATCATTCGTCGCAGATGGCAGCA TTGGATTTTATGGTTTCAGTAGCCAGTAACATCTTTATTCCTACCTATGATGGGAATATGGCAAAACTTGTGGAAGGACATCGCAGGTATTCTGGCTTTG AAAAATCCATCTTATTGGATCGGAAAAAGCTTGTAGAATTGATTGACATGCATCAAAATGGAACCATTCCGTGGAATAAGTTTGTGCATGCCGTGCAACA GGTTCACGAAAAAAGAACGGGACAACCAACTCTTCGTAGAGTTATTGTAGACAAGCCAAAGGAGGAGGATTATTTCTATGCCAACCCTCATGAGTGCTTC TAGGTCCTATTAACTCTAGTCAAGTATGACAGCACAAACTTCTGAATGTAGATATTGTACTCTTCCCAACCATGAGTTAGAAAGATGAATCTAAAAATTG TACCTTTCCACCAAGTTGTTCAAGTGCTGTGTCGAAGAATGTAGATTACCGGCATAAGGTCTTAGTGATTTTAGTATATACACATGATTTTGTAGGAAAT CGTGTAAAAGAGGAAACAATAAAAAAGAAATATCAGCTTCTAGTGAGGCTTGCAAAAGCTGTATCTTCATTTTTACCCTTCATTAATTAATTTTTTTTGC AATTTATTCTCATTGGTGCAGAAGTGTAATTCATGCATTACAGTTTCCTCTTTACAAGCAGCAGTCAAGTAATGAGTTGTAAAAAACAATAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_158740; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508697
Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 39.81% of identity |
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Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 39.81% of identity |
Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
Kegg | Link to kegg annotations (AT1G04910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432152.1) |
Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |