| Id Trinity | TRINITY_DN48174_c3_g5_i3 |
|---|---|
| Name Transcript | Ll_transcript_508730 |
| Sequence | CTTTTTTGCTACATTTCTTATCCTCATCATTTCCATCTTTGAGGTTCCCCCTATAAACTTCATGAAAATGGCTGCCATAGCATTTGGACACTTTGATGAT TCTTTCAGTTTGGGATCCATCAAAGCCTATATTGCTGAGTTCATCTCAACCTTGCTCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCTTATGGCAAGT TAACATCAGATGCTGCTGTTGATCCTGCTGGGTTGGTAGCAGTTGCTATATGCCATGCTTTTGCTCTATTTGTTGCTGTTTCAGTTGGTGCCAACATTTC TGGTGGCCATGTTAACCCAGCTGTGACTTTTGGCTTGGCTCTTGGTGGCCAGATCACAATTCTCACTGGCATCTTTTACTGGATTGCACAGCTTCTTGGC TCCATTGTTGCATGTTTTCTCCTAAAGTTTGTCACAGGAGGCTTGAGAATTCCAACCCACAATGTAGCTGCTAGTGTTGGAGCATTTGAAGGAGTTGTTA CTGAAATCATCATAACATTTGCATTGGTTTACACTGTATATGCTACAGCATCTGACCCAAAGAAAGGTTCATTAGGCACAATTGCATCTATTGCCATTGG TTTCATTGTTGGTGCCAATATCTTAGCAGCAGGACCATTTTCTGGTGGGTCCATGAACCCTGCACGTTCATTCGGCCCTGCAGTTGTTAGTGGTGACTTT CATGCCAATTGGGTCTATTGGGTTGGACCTCTAATTGGTGCTTGTTTAGCTGCTCTTATATATGGAAATGTGTTCTTATCACAATCTGAACAAAACTTTA AGGGCTTGTTTGAGAGTTTGATTTTGGAGGGAAGTAATGGAAATGCGAGTATTTAAAGTCATCTCAGACCTGTATTTCATGGCTCCCAATCCTTTCTCTT CCCCGTTGCCCTTCGAAAACTAACTCGCAAGCAGATCCTAAGTTTAAAGTGTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158747; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508730
| Blastp | Aquaporin TIP2-1 from Arabidopsis with 80.58% of identity |
|---|---|
| Blastx | Aquaporin TIP2-1 from Arabidopsis with 80.58% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (AT3G16240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020228906.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |