| Id Trinity | TRINITY_DN48175_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_508017 |
| Sequence | GACATGGCTTTTCACTATTCCTTATTCCTTTCCGTGTATGTTCCCAGCTCGGACATGATTGCATCCAGTGCGAGGATACATATGGAAAACAAAAAAACCA TTTTTGAGCCCCTTGAATTAGTGGGCCCAGTGTTGGCCCTTAGGGCCTGCCTTGAATGTGATATATTATTGGTGAAAGATATGAGTAGATAATTTATTTT CTTACTCTATTCGTTATGTATGTTACTTTTCTTCATTTAAAAATTAAAATATATTATAAAAAGAAAATAAAACACGAGTGAATTTAAAGAAATAAGTTAT CTCATAGTGTGAGTTTAGCCTAGTGATAAGGTTGTTTCTTAGTGACTATGAGATTATAGGTTCAAATTATGGAAACATCTATCCTCTTCAGACTCCACTA AATACGAGTCTCGTGGATTAGGTCGCCATTTACTTATAAGAAAGCATGGTGCTTAACATTCTTTATGGAATGTGAGGCCTATGAACACACCACAAGTAAG CCTTACTTAGTTTTGACAATATTCTTTAATCATTGAATATTGAATAGCTTTTGGTTCTAGAGTTTAGCATGTTATGATCACAATATGGAGTTCATAGAAT GGTATATGTCACCCCCTTTTTGTTATCATGAAACTCAGGAGATTCTTCCTACACTACTATTTCTTTTATATATATCTTTCCAATTCAGATATATGTTCAA TGATATGCAAGTTCATTAGATGTGAGATTGTAGTTGCATGGTTAAGACGGGTTGGGCTCCTTTCGAGTACTGGATTGCAGCAAGAATTTTTTTTTTATAT TTTTATATTTTTTAATTTAAAAATCAATAAACATTTGGACCCTTAGATTTTTTTGTATGTCATATGTCAAGAGATTTACCCGGTACCCGAGAGGATCTCG ACTCGATTTTGATTGTTGGTGAACTTTAGCTAACCAAAATTACTATGATGGTGGCATTATCTTGTACCATGTGAGATTTCTCAATGAGAGGAAAAACATG GCATTAAATCTTATAGCATAAAATACAGGTGGAGTACATGTTTATGGACTTCTTAGATCTTAAGCAGCTTCACTAATATTTATGGCGTGCTGATAGTCAC CTGATATGCCGTTTTCTGTATATGGGTACACTATATGTAGTATGTTACCCAGTCAAGTATCGATACATTGAGGGTGTACTCACTAGGTTTTCTATAGTTT CAAACACAGTCATTTTTAGTGCTGTTTCTCATAGATTTGTATCAAGTTTTGCTTCACTGTAGGAGAAATACGAAGGGATAAAAAATTTCTTGTACGCCGT AACTCACTCATATAGGTGAGTGCACATCACTAATTACTCTTATTTTCGTTTTCTTTTCCTTTAACTAAAACCGTAGATAAAAATCTAGTTTGTTACTTAT GGTGAATCAATTCACAAAAGAATCACGAATTGGTAAGCAAGAGCCAATTCAGAGTTCTCTACCAAACTCGGAGAATTATGTTTCAATGGTTATAACATTG AATGCTTAAAATGTTTGGTGATTGCATACTAATATTAGTATATATTCATTGAAAACTTTTCTCAATGCAGGAGGATTGCACAAGTTAAAGAGAATCAATG TCAAATTTGTGTAGAAGATGTTATGTATTTGCTGATTCTGAACAAGTTTTCTGAGATTAGAGTCCCAATGGTCCCAAAGATTTCTAGTTGCCTTTATAAT AGAAGGCTAGAGATATTGCCTTCTAAGGACTGGGAGTTAGAGTCTATTCACAGCATGGAGGTTTTGGATATCATAAGAGAACATGTCAGTTCCGTAACGG GCTTGAGAGCAAATTCTAGTGTAAACGAGAGTTGGGCAACGACTAAAATTAGGCAATTCTGGCTCGCACGAGTTTACGTCGCCTCGATATTATATGGTTA CCTTTTGAAGTCAGCTTCATTGAGGTACCGCCTAGAACAAAGTCTTTCTTCGGTTAACCATGATTTGCATCTCAATCAAAGGACTGCCCTCTCACCGCTC TCATTTCATGACATGTGCTCTTATGGATCGAAAGATGAGATGTTCGGCCACAAGAGTGACATGCAATCTGTATGGCAAGATATAATCAGTCAGCAGGAAG AGGAAGTTGAAGATTTGAAATGTTACGTCAGGGGCTTTCGCTCCGGATCATTGCAGAGATTTTCTAAATTGAGATCTAAGGAGGCTGTGAAGTTGGTAGA AAGTTATAGTCATGCACTGTTTGGGAATTTGGAAACTGGTTTAGTGGAGAATGATGATATTATTTTGACTTCATTTTCTAGTCTAAAGAGGTTAGTTTTG GAGGCTATTGCTTTTGGATCTTTCCTTTGGGAGACAGAAGATTACATTGACAATGTATATAAGCTTAAAGATCATGAAGCAGTTTAAAGGCACATGTTGC TAAACAAGTTCCTACACTTTTGAGGAATTCTCTTTGTATATACAATGAGTTATTTTAGCTTTTGAGTGTTGGCTAATTGTATAAATTTTAGTATAAAATG ACTCAAAATAATGTATATCTTAATGTTAGATCCATATGTGAATATTGTGAAGCTTCTTATGGATTTGATGTGTTTTTTGAGAAGAATATTCATAGGAGAA ATAATGCTACTTGAATTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158758; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508017
| Blastp | UV-B-induced protein At3g17800, chloroplastic from Arabidopsis with 31.52% of identity |
|---|---|
| Blastx | UV-B-induced protein At3g17800, chloroplastic from Arabidopsis with 32.36% of identity |
| Eggnog | Protein of unknown function (DUF760)(ENOG410YDXB) |
| Kegg | Link to kegg annotations (AT3G17800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433661.1) |
| Pfam | Protein of unknown function (DUF760) (PF05542.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |