Ll_transcript_508021

• Id Trinity: TRINITY_DN48175_c5_g1_i7
• Name Transcript: Ll_transcript_508021
• Sequence: GACATGGCTTTTCACTATTCCTTATTCCTTTCCGTGTATGTTCCCAGCTCGGACATGATTGCATCCAGTGCGAGGATACATATGGAAAACAAAAAAACCA TTTTTGAGCCCCTTGAATTAGTGGGCCCAGTGTTGGCCCTTAGGGCCTGCCTTGAATGTGATATATTATTGGTGAAAGATATGAGTAGATAATTTATTTT CTTACTCTATTCGTTATGTATGTTACTTTTCTTCATTTAAAAATTAAAATATATTATAAAAAGAAAATAAAACACGAGTGAATTTAAAGAAATAAGTTAT CTCATAGTGTGAGTTTAGCCTAGTGATAAGGTTGTTTCTTAGTGACTATGAGATTATAGGTTCAAATTATGGAAACATCTATCCTCTTCAGACTCCACTA AATACGAGTCTCGTGGATTAGGTCGCCATTTACTTATAAGAAAGCATGGTGCTTAACATTCTTTATGGAATGTGAGGCCTATGAACACACCACAAGTAAG CCTTACTTAGTTTTGACAATATTCTTTAATCATTGAATATTGAATAGCTTTTGGTTCTAGAGTTTAGCATGTTATGATCACAATATGGAGTTCATAGAAT GGTATATGTCACCCCCTTTTTGTTATCATGAAACTCAGGAGATTCTTCCTACACTACTATTTCTTTTATATATATCTTTCCAATTCAGATATATGTTCAA TGATATACAAGTTCATTAGATGTGAGATTGTAGTTGCATGGTTAAGACGGGTTGGGTTCCTTTCGAGTACTGGATTGCGGCAAGAAAAAGAAATTTTTAT ATTATTTAATGTAAAAATCAATGAACATTTGGACCCTTAGATTTTTGTGTGTGCCACATGTCAAGATATCTATCCAGTACTGGAGAGGACCTCGACTCGA TTTAGATTGTTGGTGAACATATATAGTGTTTAGCTAACCAAAATTACTATGATGGTGGCATTATCTTTGTACCATGTGAGACTTCTCCATGAGAGGAAAA ACAGGGCATTAAATCTTATAGCATAAAATATAGGTGAACTACATATTTACGGACTTCTTAGATCAGCTTCACCAATATTTATGGCGTGCCGATAGTCACC TGATATGCCGTTTTCTGTATATGGGTACACAATGTGTAGTATGTTACCCAGTCAAGTTTCGATACATTGAGGGTGTACTCACTAGGTTTTCTATAGTTTC AAACACAGTCATTTTTAGTGCTGTTTCTCATAGATTTGTATCAAGTTTTGCTTCACTGTAGGAGAAATACGAAGGGATAAAAAATTTCTTGTACGCCGTA ACTCACTCATATAGGTGAGTGCACATCACTAATTACTCTTATTTTCGTTTTCTTTTCCTTTAACTAAAACCGTAGATAAAAATCTAGTTTGTTACTTATG GTGAATCAATTCACAAAAGAATCACGAATTGGTAAGCAAGAGCCAATTCAGAGTTCTCTACCAAACTCGGAGAATTATGTTTCAATGGTTATAACATTGA ATGCTTAAAATGTTTGGTGATTGCATACTAATATTAGTATATATTCATTGAAAACTTTTCTCAATGCAGGAGGATTGCACAAGTTAAAGAGAATCAATGT CAAATTTGTGTAGAAGATGTTATGTATTTGCTGATTCTGAACAAGTTTTCTGAGATTAGAGTCCCAATGGTCCCAAAGATTTCTAGTTGCCTTTATAATA GAAGGCTAGAGATATTGCCTTCTAAAGATTGGGAACTAGAGTCTATTCATACCTTAGAAATTTTGGATATTATCAAAGAACATGTAACTAATGTAACTGG CTTGAGAGCAAATTCTAGTGTAACTGAGAGTTGGGCAACAACCGAAGTTCGACATGTTTTACTCGGCCAAGTTTATGTCGCCTCCATATTATACGGCTAC TTTTTGAAGTCAGTTTCATTGAGGTATCGCCTAGAACGAAACCTATCAAATAACGATCTTCGTCTCGGTCACAGGGCTGCCCTTTCATTTAACGATATGT GTCGTAATGGACTCAAAGACTCTATATTCGGCGGTTCGAGTAACATGCAATCAACAGGGCAAGGTTTAGTGAAGCAGGAAGAGGAAAATGAAGATCTAAA ATGCTATGTTATGAGAATTCACACTGAATCATTGCAGAAATGTGACAAATTTAGATCTAAAGAGGGTGTGAATTTAGTAGGGAATTACACTTGTGCACTT TTTAACAATGATGAATCTGGTTTAGTTGAGAATGATGATGTTATATTGACTTCATTTTCTAGTCTTAAGAGACTAGTTTTGGAAGCTGTTGCTTTTGGAA CTTTCCTATGGGAGACAGAAGATTACATTGACAATTTATATAAGCTTAAGAATAATTGAGTAATGTAAAGAAACCATAGGTTGCTACAAAATCTTAAGTT TGGTGAGTTTTCCTTGTATATATATTGAGTTTTGTTTTTAGAATTTCAGTGTTGGGTTATGTTTATATTCTATAGTTCAGATTTGATTTCCTCTGCATAA TGTATAGTTTTTACTTTTTAGTAATATGGCTTTTTGTAAGTTGATGGAGATTTTAAGTTGTTCAATGTTGTTCATGTATATGGATTTATGTTTGAATATT ATCCATCTTTTTATATGATGGGCGTAAGACATTATCTCATAATTTTTCTGTTTTCATATCTCTAACCAGT
• Tissue: pods
• Gene name: LI_gene_158758;
• Additional information: details;

Expression of Ll_transcript_508021

FPKM

• PAB: 2
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.5
• PS3: 0.8
• PW1: 0
• PW2: 0.4
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508021

• Blastp: UV-B-induced protein At3g17800, chloroplastic from Arabidopsis with 31.13% of identity
• Blastx: UV-B-induced protein At3g17800, chloroplastic from Arabidopsis with 32% of identity
• Eggnog: Protein of unknown function (DUF760)(ENOG410YDXB)
• Kegg: Link to kegg annotations (AT3G17800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463233.1)
• Pfam: Protein of unknown function (DUF760) (PF05542.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;