Id Trinity | TRINITY_DN48176_c2_g1_i1 |
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Name Transcript | Ll_transcript_508461 |
Sequence | CAACTTTCATCTTGATGCCATATATAATAACTTCTTGAAGTTAGTAACATAGCAAAGAAGCTTGAGAAACTAATTCTACTTTGTAGTCAATAATAATGGC TACCTTCAATCTTCACACTGAAACTGTTCAATCATGGCTTTTCCTTAGTAGACTTCACATTCTTTCTCACTTACTTGTTGTTCTCTCACTCTTTTATTAT CGCCTCATCCATGACACTACCACACCAACCCTACCATGGATTCTCCTCACCGGAGCTGAGCTTCTTTTGGCCGTCCTATGGTTCTTCAACCAAGCCTTCC GGTGGCATCCGGTGTCGCGGTCGGTTAAGATAGAGAATTTGCCTTCTGATGCAACCCTACCAGGGCTTGACATCTATATTTGCACACTTGACCCCGAAAA GGAGCCAACTGTGGAAGTCATGGAAACCGTCGTATCAGCGGTTTCCATGGATTACCCACCAGACAAGCTCGCCGTATATCTTTCTGATGACGGCGGCTGT CCGGTGACTTTATATGGCATTAAGGAGGCTAGTGAGTTTGCTAAAGTGTGGGTCCCTTTTTGCAACAAGTATGGGATAAAGTCAAGGACTCCAAAGGTTT TCTTCTCATCCATAGGGGAAGATGAGCAACTTATTAGAAGTGATGAATTTAGGGTAGAGAATGAGAAGATCAAGGCCAAATATGAGAGAATGCAAAAAAA TATTGAGAAATTTGGTTCAGACCCTCAGAATCTTCGTATTGTTAGTGACAGACCTGCTAGAATAGAGATTATAAATGAGGAACCGGGAACTCCTCTTGTT GTGTACGTGTCTCGTGAAAGAAGACCATCTCTCCCTCACAAATTCAAAGGAGGAGCTCTCAACACATTGTTCAGAGTATCAGGTTTATTAAGCAATGGGC CTTATGTACTTGCTGTGGATTGTGACATGTTTTGCAATGATCCATCCTCAGCCAAACAAGCCATGTGTTTCTTCCTTGATCCTCAAACTTCCAAATATAT TTCATTTGTTCAATTCCCTCAAATGTTTCATAACCTTAGTAAGAAAGACATTTATGATAATCAATCAAGGACTGCTTTTAAGACAATGTGGCAAGGCATG GATGGACTAAGAGGTCCTGGGCTTTCTGGAAGTGGCAATTACTTAAACAGAAGTGCATTACTATTTGGAGGTCCAAATGAAAAAGATGATTATTTACTTG ATGCCCAAAACTACTTTGGCAAATCTGCAATGTTCATAGAATCACTCAAGGTCATAAGTGGACAGAAATCTGCCAAAAAGGATATTCCAAGGGATGCAAT TTTGAAAGAAGCACAACTACTGGCCTCTTGTTCCTATGAAACAAATACAAAATGGGGTACTGAGGTAGGATTCTCATATGGAATATTATTGGAGAGTACT ATTACTGGTTATCTTTTACACAGCAGAGGATGGAGATCAGCATATCTTTACCCAAAAACACCTTGTTTCTTAGGATGTGCCCCAACTGATATCAAAGAAG GAATGCTTCAATTGGTGAAATGGTTATCTGAGCTATGTTTACTTGGAGTTTCCAAATACAGTCCTTTTACATATGGCTTTTCAACAATGCCATTTTTCCA TGCCCTAACTTATTGCTTCTTGGCATCATCATCATTATACTCTATTGTCTTCATTCTTTATGGCATTGTTCCTCAACTTTGTTTCTTCAAAGGAATCCCC GTCTTTCCGAAGGTTACAGATCCATGGTTTGCAGTGTTTGCATTCCTATACATAGCAACACAGATTCAACATTTGATTGAGGTTCTTTCTGGTGGAGGCT CAATAACAATGTGGTGGGATGAACAAAGAATATGGATATTAAAATCAGTTACAAGCTTATTTGCAATCACAGAAGCAATAAAGAAATGGTTAGGATTGAA CAAGAAGAAATTTAGCTTATCAAACAAAGCCATTGACAAAGAGAATCTCAAGAAATATGAACAAGGTAGGTTCAATTTCCAAGGTGCAGCATTGTACATG TCTCCTATGGTTGTGTTACTCATTGTCAACATTGTTTGTTTCTTTGGTGGTTTATGGAGACTAGTTAAAGTCAAAGATTTTGAAGACATGTTTGGTCAAC TTTTCTTGCTTAGTTATGTAATTGTTCTTAGTTATCCCATTCTTGAGGCAATTGTAACAATGAAAAGTAAGAGTGGGTAGGGAACTTTTTTTTGTTGATA AAAATGGGTATTGAATTTTAGTTCAAATAAATAGGCCTATTCAAGATCCTGAAATGGATAATATTGTATGAGTGTATCTTGGAATGGAATTGCTTTACTC CATCATGCAATTTACCTTCAAATTTAAGTACTTCATTTCATGAAGAATTGCATAGTGGATTTCTATCCAATTGTCAATGACAAAACATAAATAAATAGGA TACCGGTACAGAGTTATGTTATTG BLAST |
Tissue | pods |
Gene name | LI_gene_158768; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508461
Blastp | Cellulose synthase-like protein G1 from Arabidopsis with 35.22% of identity |
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Blastx | Cellulose synthase-like protein G1 from Arabidopsis with 35.8% of identity |
Eggnog | Glycosyl transferase, family 2(COG1215) |
Kegg | Link to kegg annotations (AT4G24010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412953.1) |
Pfam | Cellulose synthase (PF03552.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |