| Id Trinity | TRINITY_DN48176_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_508464 |
| Sequence | CAACTTTCATCTTGATGCCATATATAATAACTTCTTGAAGTTAGTAACATAGCAAAGAAGCTTGAGAAACTAATTCTACTTTGTAGTCAATAATAATGGC TACCTTCAATCTTCACACTGAAACTGTTCAATCATGGCTTTTCCTTAGTAGACTTCACATTCTTTCTCACTTACTTGTTGTTCTCTCACTCTTTTATTAT CGCCTCATCCATGACACTACCACACCAACCCTACCATGGATTCTCCTCACCGGAGCTGAGCTTCTTTTGGCCGTCCTATGGTTCTTCAACCAAGCCTTCC GGTGGCATCCGGTGTCGCGGTCGGTTAAGATAGAGAATTTGCCTTCTGATGCAACCCTACCAGGGCTTGACATCTATATTTGCACACTTGACCCCGAAAA GGAGCCAACTGTGGAAGTCATGGAAACCGTCGTATCAGCGGTTTCCATGGATTACCCACCAGACAAGCTCGCCGTATATCTTTCTGATGACGGCGGCTGT CCGGTGACTTTATATGGCATTAAGGAGGCTAGTGAGTTTGCTAAAGTGTGGGTCCCTTTTTGCAACAAGTATGGGATAAAGTCAAGGACTCCAAAGGTTT TCTTCTCATCCATAGGGGAAGATGAGCAACTTATTAGAAGTGATGAATTTAGGGTAGAGAATGAGAAGATCAAGGCCAAATATGAGAGAATGCAAAAAAA TATTGAGAAATTTGGTTCAGACCCTCAGAATCTTCGTATTGTTAGTGACAGACCTGCTAGAATAGAGATTATAAATGAGGAACCGGGAACTCCTCTTGTT GTGTACGTGTCTCGTGAAAGAAGACCATCTCTCCCTCACAAATTCAAAGGAGGAGCTCTCAACACATTGGTCCCTTCTCTTTCTCTCTCTCTAAATGTTA TCTTTATTTGTGTATATTTCCGGCTCGAATATGATTGACTTCAGTCCAAGTATACACGTGAGAAACCAAAAAAAATATGTGTATATGTATATATATAGTA TATGGTTTTAATGCATGTGATGAAATGTTGTTGCAGTTCAGAGTATCAGGTTTATTAAGCAATGGGCCTTATGTACTTGCTGTGGATTGTGACATGTTTT GCAATGATCCATCCTCAGCCAAACAAGCCATGTGTTTCTTCCTTGATCCTCAAACTTCCAAATATATTTCATTTGTTCAATTCCCTCAAATGTTTCATAA CCTTAGTAAGAAAGACATTTATGATAATCAATCAAGGACTGCTTTTAAGACAATGTGGCAAGGCATGGATGGACTAAGAGGTCCTGGGCTTTCTGGAAGT GGCAATTACTTAAACAGAAGTGCATTACTATTTGGAGGTCCAAATGAAAAAGATGATTATTTACTTGATGCCCAAAACTACTTTGGCAAATCTGCAATGT TCATAGAATCACTCAAGGTCATAAGTGGACAGAAATCTGCCAAAAAGGATATTCCAAGGGATGCAATTTTGAAAGAAGCACAACTACTGGCCTCTTGTTC CTATGAAACAAATACAAAATGGGGTACTGAGGTAGGATTCTCATATGGAATATTATTGGAGAGTACTATTACTGGTTATCTTTTACACAGCAGAGGATGG AGATCAGCATATCTTTACCCAAAAACACCTTGTTTCTTAGGATGTGCCCCAACTGATATCAAAGAAGGAATGCTTCAATTGGTGAAATGGTTATCTGAGC TATGTTTACTTGGAGTTTCCAAATACAGTCCTTTTACATATGGCTTTTCAACAATGCCATTTTTCCATGCCCTAACTTATTGCTTCTTGGCATCATCATC ATTATACTCTATTGTCTTCATTCTTTATGGCATTGTTCCTCAACTTTGTTTCTTCAAAGGAATCCCCGTCTTTCCGAAGGTGAACTTCCTATACTCATCA ATATACACGAGTTTACAGGAACGAAAACCGAAAGACTTAAATTTTACAAGGACTTAGAACCTATTTAAGGAAATAATTAGTACTTTTCATTGAATAGAAG TTTACATGGTTAGATTTTTTTTTTCCTTCTTCTATGTTACAGGTTACAGATCCATGGTTTGCAGTGTTTGCATTCCTATACATAGCAACACAGATTCAAC ATTTGATTGAGGTTCTTTCTGGTGGAGGCTCAATAACAATGTGGTGGGATGAACAAAGAATATGGATATTAAAATCAGTTACAAGCTTATTTGCAATCAC AGAAGCAATAAAGAAATGGTTAGGATTGAACAAGAAGAAATTTAGCTTATCAAACAAAGCCATTGACAAAGAGAATCTCAAGAAATATGAACAAGGTAGG TTCAATTTCCAAGGTGCAGCATTGTACATGTCTCCTATGGTTGTGTTACTCATTGTCAACATTGTTTGTTTCTTTGGTGGTTTATGGAGACTAGTTAAAG TCAAAGATTTTGAAGACATGTTTGGTCAACTTTTCTTGCTTAGTTATGTAATTGTTCTTAGTTATCCCATTCTTGAGGCAATTGTAACAATGAAAAGTAA GAGTGGGTAGGGAACTTTTTTTTGTTGATAAAAATGGGTATTGAATTTTAGTTCAAATAAATAGGCCTATTCAAGATCCTGAAATGGATAATATTGTATG AGTGTATCTTGGAATGGAATTGCTTTACTCCATCATGCAATTTACCTTCAAATTTAAGTACTTCATTTCATGAAGAATTGCATAGTGGATTTCTATCCAA TTGTCAATGACAAAACATAAATAAATAGGATACCGGTACAGAGTTATGTTATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508464
| Blastp | Cellulose synthase-like protein E1 from Oryza sativa with 34.48% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein G1 from Arabidopsis with 36.75% of identity |
| Eggnog | cellulose synthase-like protein(ENOG410Y931) |
| Kegg | Link to kegg annotations (4347370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412953.1) |
| Pfam | Cellulose synthase (PF03552.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |