Id Trinity | TRINITY_DN48178_c2_g2_i4 |
---|---|
Name Transcript | Ll_transcript_507990 |
Sequence | CGGAACGGAACGCGGACTCGAGAGGAAGGATAATGTTAGATTTAAATGTGCGTTGAGGTCCGCACTTGTACTTACTTTACTTACCTCGATGTTCCATTTT CCAACACGGTAACCGCAAAGGTGGTCTTGTTTTGTTTCTTTTCTTTTCTCTTCAAACATAGAAAGTGAAAGTGAGTGAGAGAGAATGGGAAAACCTGTCT CATGCTTCAAACTAATCACATGCAGCGGTGGCGCGTCGGAGAAAGATGAATCTCAGGTCAAGGATTCCAATGATAAAAGTGGTTGGAGTTTCCGGAAGAA ATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGAATGTGGAGGCCCCATCCTCTGCAAATAAGCAGAGTACAGAATGTGATAGTTTTAATTTTCAAGCA CTTCCTGAACCTAATGTTGTTGAGAAAGTTTACACAACACATTCCTCAGATGAGAAGCCCCAGTTATCCTCATTGGAAAGCTCACAGATATCAGAAACAA TTGCCATTGAACCTGAGCGTAAGGAGGATGTCAGTTCACCAGAGTCGGATTTTATTATCATTCAGGCTGCCATCAGAGGGTTATTGGCTCAGAGAGACCT GCTACAGCGTAAGAATGTAGTAAAGTTGCAAGCTGCTATCCGTGGGCACTTGGTCCGGAAGCATGCTATAGGAACCCTGCGTTGTGTTCAAGCCATCATC AAAATGCAGGTCCTTGTGCGAGCTCGTCATGCTCAGAAGTACAAGGGTGGCAGAAATGACTCCTCAAAAAATTTGGGGAATGAAAATCACATAACCAAAT CAAATGTGACATACACTTCCATTGAGAAGCTGCTTAGCAATAGTTTTGCTCGTCAGCTGTTGGAATCAACACCAAAGAACAGACCTATCCATGTCAAGTG TAATCCTTCTAAAGATGACTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTATCGTTGAAAGATACTGCAGAGTACAAAAAATCAAGTTCTCTGAAG GACCAATCGGACATAATCGATGATAGCACTTCTGTGTTTCAATTTGAAGCAGGAATTTCGTCTAAAGTTAATCTCCACTCAGCTGATTCCAAGCCTGCTG TTGGTGATCCCCTTTTGCCTTCTAGGGATGAAGAAAAACTGACTAGTTATGATGCAAATAACTCAGGCTTTCATGAAAGCTTCTCTACACCATATCTGGT GAAGGATAACTTGGAACAGGTTCCTCCTGAAAAGTCAATTACTTATGATGATACTGTAAAATCTGCTGAAAATGATTTCTTCCGAAATGAGAATTTAGCG TCAGACTCAACTGCTCCACTAGAGCTTAACTCGTTTCCTGAAAAGCCTGAAATAGATGGTGAGCAGCGCAAACGATCTATGAAAAGATTTGCCTCGGATC AATTAGAAGCTGAGGGAAAGAAATCTGTAAATGGATCAAGAAAGCTTAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAACTTAGTTCAAT GACAAATTCAGGTAGGACAAACAGTCTGTCCAATCAGGATGCAACTGTTGAATCACAAGCAGATATCTCTTCTGTCAGCACAGACACTGCATATAGATCA AAAGAGCTGCCATTTGAGAACCTTGCTCCTAATCTTTCACAGGTTGTGGACTCTGAATGTGGTACTGAGTTGTCGATTTCTTCCACTCTGGATTCTCCTG ACATATCAGAGACTGGTGCTGTGGGAAATGAGCGAGATGCCAAAAATTTAGTACAAGGGATTGGTAATCTTGAGAACACAACAAATCATGATGTTGAGGC TAATATTCCACGTGTCATTCCTGCTTCAAGTTCAGCTACATCTGTATTGGACCAGACAGAGATTGTTGATGGCACTAGTGGCAATATGGTTAAGTCAGTG GTAGCTGTGGACTCTGAAGAGCATGCTATTAGGGCTGAGAAAAATGCGCCTGCCCTGCCTAGAGAGCAGGTAGAGTCTGCTCAGCAAGATTTCAGACCAT CTCTAGAAGAAGCTTCGCCGAGAAGCCATATAACTGTCCCTGAATCACAAGGAACACCTTCGAGTCAGATTTCTATCAAACTTAAAGAGAGCAAAATCAA TAAGACTGGATCAAGCAAGAAACGTGGGTCCCCGTCAGTGGGTATCAAATCCCCTGCAAATGCAAATAATGATTCAGGCTCAAGAGGTAGTAGGGAGAAG CTGCCTAAAGATCAGCTTAGTGGCAAGAGACGCAGTTCCTTTGGCTCAGTAAAACCTGATCATGTTGATCAAGAACCAAGTGATAATATTAGTAACAACA ACCCACTTCCTCGTTTCATGCAAGTTACAGAATCTGCTAGGGCCAAGATCAATGCAAATACCTCTCCAAGGTCAAGTCCAGATGTGCATGATGAAGACAT CCAACTTAAGAAAAGACATTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCGCGCATCCAACGATCAATGTCTCAAGCGCAGCAGATTGCAAAAGGG AACGGTGTGCATCCTCCACAAGAGAGAAAATGGTTGAGGTGAATTGGCAGCTAAACTGTGCTCACATGCTTCTGCAATATAGTTGATGACCAGCCATGGA GTGGCACTTTGGAATTTCCGATTTAATTTGTGATTTGGTTTTTGAAGGATTGCGGCTTTTTATTTCTTTCCGATTTTCTTCGTTCTTCTATTCTTTGCCT CCGAAATTCGAAGCTGCCCAGTTTGGTTGTGACAAGGGTTCGCATAAGAACATCATATGTGAAAGTGAGGCTTATATGTATATTGTTGCTCACTTCATTG TGTTATTATCAGTAAGTTTCAGACACATGTGCTTGTGATATCTTAATGTTTGTTAAACATATTTTGCTTCACCATTACCACAGATTTTTTTTGTTCATTG CCCAACATTATTCCGAGTCCAGTCTGCATGACAGTGTGATGCGTATCTAATCGGTTAAGGTTGTGTATATCTATATCTTCTCTATTTTTACTAAGTGAGA GTCTCGTGTACTAAGATACCCTTTTATTATTTTGAATAAGATCTAACTAAAAATAAATAAATAGCCCTATTTGGGTTTGT BLAST |
Tissue | pods |
Gene name | LI_gene_158783; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507990
Blastp | Protein IQ-DOMAIN 32 from Arabidopsis with 37.01% of identity |
---|---|
Blastx | Protein IQ-DOMAIN 32 from Arabidopsis with 37.27% of identity |
Eggnog | IQ-domain(ENOG410Y9MX) |
Kegg | Link to kegg annotations (AT1G19870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415289.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |