Ll_transcript_507995

• Id Trinity: TRINITY_DN48178_c2_g2_i6
• Name Transcript: Ll_transcript_507995
• Sequence: CGGAACGGAACGCGGACTCGAGAGGAAGGATAATGTTAGATTTAAATGTGCGTTGAGGTCCGCACTTGTACTTACTTTACTTACCTCGATGTTCCATTTT CCAACACGGTAACCGCAAAGGTGGTCTTGTTTTGTTTCTTTTCTTTTCTCTTCAAACATAGAAAGTGAAAGTGAGTGAGAGAGAATGGGAAAACCTGTCT CATGCTTCAAACTAATCACATGCAGCGGTGGCGCGTCGGAGAAAGATGAATCTCAGGTCAAGGATTCCAATGATAAAAGTGGTTGGAGTTTCCGGAAGAA ATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGAATGTGGAGGCCCCATCCTCTGCAAATAAGCAGAGTACAGAATGTGATAGTTTTAATTTTCAAGCA CTTCCTGAACCTAATGTTGTTGAGAAAGTTTACACAACACATTCCTCAGATGAGAAGCCCCAGTTATCCTCATTGGAAAGCTCACAGATATCAGAAACAA TTGCCATTGAACCTGAGCGTAAGGAGGATGTCAGTTCACCAGAGTCGGATTTTATTATCATTCAGGCTGCCATCAGAGGGTTATTGGCTCAGAGAGACCT GCTACAGCGTAAGAATGTAGTAAAGTTGCAAGCTGCTATCCGTGGGCACTTGGTCCGGAAGCATGCTATAGGAACCCTGCGTTGTGTTCAAGCCATCATC AAAATGCAGGTCCTTGTGCGAGCTCGTCATGCTCAGAAGTACAAGGGTGGCAGAAATGACTCCTCAAAAAATTTGGTATTGTTATTTAAGAATCATTGAT TGGCAGATGGCAGATGCTTTGCTTGCCTGTTAGGTTGCTACTTTTGAAGTTTGCGATCTTTTATGGGTGGTATCAATGCATCAGGATGTTAACTTCAAAG ATTATCATTCTATTTGTTGAATGGAAATAGTAGTTTAGTCTTTAGAGGTCCCCTCTCCCTTTTCCCTGAAAAAACAATCTCAAAGTACCATGAAAATTCT TTACAAATGCTTGAACCTAGGATCTCATTCTTTGTTTGATAGTCATGGTTCATTGACCCTTGCTCAAGGTAGTTTCATTTGTTAAAAGCAATATTATTAT TAGATCTATATTGTGGTCAATTAACATGCTTGAGCGAGTGTGCTAAGTTTGATGGTTATTTTTCCTGGTTTCAGGGGAATGAAAATCACATAACCAAATC AAATGTGACATACACTTCCATTGAGAAGCTGCTTAGCAATAGTTTTGCTCGTCAGCTGTTGGAATCAACACCAAAGAACAGACCTATCCATGTCAAGTGT AATCCTTCTAAAGATGACTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTATCGTTGAAAGATACTGCAGAGTACAAAAAATCAAGTTCTCTGAAGG ACCAATCGGACATAATCGATGATAGCACTTCTGTGTTTCAATTTGAAGCAGGAATTTCGTCTAAAGTTAATCTCCACTCAGCTGATTCCAAGCCTGCTGT TGGTGATCCCCTTTTGCCTTCTAGGGATGAAGAAAAACTGACTAGTTATGATGCAAATAACTCAGGCTTTCATGAAAGCTTCTCTACACCATATCTGGTG AAGGATAACTTGGAACAGGTTCCTCCTGAAAAGTCAATTACTTATGATGATACTGTAAAATCTGCTGAAAATGATTTCTTCCGAAATGAGAATTTAGCGT CAGACTCAACTGCTCCACTAGAGCTTAACTCGTTTCCTGAAAAGCCTGAAATAGATGGTGAGCAGCGCAAACGATCTATGAAAAGATTTGCCTCGGATCA ATTAGAAGCTGAGGGAAAGAAATCTGTAAATGGATCAAGAAAGCTTAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAACTTAGTTCAATG ACAAATTCAGGTAGGACAAACAGTCTGTCCAATCAGGATGCAACTGTTGAATCACAAGCAGATATCTCTTCTGTCAGCACAGACACTGCATATAGATCAA AAGAGCTGCCATTTGAGAACCTTGCTCCTAATCTTTCACAGGTTGTGGACTCTGAATGTGGTACTGAGTTGTCGATTTCTTCCACTCTGGATTCTCCTGA CATATCAGAGACTGGTGCTGTGGGAAATGAGCGAGATGCCAAAAATTTAGTACAAGGGATTGGTAATCTTGAGAACACAACAAATCATGATGTTGAGGCT AATATTCCACGTGTCATTCCTGCTTCAAGTTCAGCTACATCTGTATTGGACCAGACAGAGATTGTTGATGGCACTAGTGGCAATATGGTTAAGTCAGTGG TAGCTGTGGACTCTGAAGAGCATGCTATTAGGGCTGAGAAAAATGCGCCTGCCCTGCCTAGAGAGCAGGTAGAGTCTGCTCAGCAAGATTTCAGACCATC TCTAGAAGAAGCTTCGCCGAGAAGCCATATAACTGTCCCTGAATCACAAGGAACACCTTCGAGTCAGATTTCTATCAAACTTAAAGAGAGCAAAATCAAT AAGACTGGATCAAGCAAGAAACGTGGGTCCCCGTCAGTGGGTATCAAATCCCCTGCAAATGCAAATAATGATTCAGGCTCAAGAGGTAGTAGGGAGAAGC TGCCTAAAGATCAGCTTAGTGGCAAGAGACGCAGTTCCTTTGGCTCAGTAAAACCTGATCATGTTGATCAAGAACCAAGTGATAATATTAGTAACAACAA CCCACTTCCTCGTTTCATGCAAGTTACAGAATCTGCTAGGGCCAAGATCAATGCAAATACCTCTCCAAGGTCAAGTCCAGATGTGCATGATGAAGACATC CAACTTAAGAAAAGACATTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCGCGCATCCAACGATCAATGTCTCAAGCGCAGCAGATTGCAAAAGGGA ACGGTGTGCATCCTCCACAAGAGAGAAAATGGTTGAGGTGAATTGGCAGCTAAACTGTGCTCACATGCTTCTGCAATATAGTTGATGACCAGCCATGGAG TGGCACTTTGGAATTTCCGATTTAATTTGTGATTTGGTTTTTGAAGGATTGCGGCTTTTTATTTCTTTCCGATTTTCTTCGTTCTTCTATTCTTTGCCTC CGAAATTCGAAGCTGCCCAGTTTGGTTGTGACAAGGGTTCGCATAAGAACATCATATGTGAAAGTGAGGCTTATATGTATATTGTTGCTCACTTCATTGT GTTATTATCAGTAAGTTTCAGACACATGTGCTTGTGATATCTTAATGTTTGTTAAACATATTTTGCTTCACCATTACCACAGATTTTTTTTGTTCATTGC CCAACATTATTCCGAGTCCAGTCTGCATGACAGTGTGATGCGTATCTAATCGGTTAAGGTTGTGTATATCTATATCTTCTCTATTTTTACTAAGTGAGAG TCTCGTGTACTAAGATACCCTTTTATTATTTTGAATAAGATCTAACTAAAAATAAATAAATAGCCCTATTTGGGTTTGT
• Tissue: pods
• Gene name: LI_gene_158783;
• Additional information: details;

Expression of Ll_transcript_507995

FPKM

• PAB: 0.3
• PNAB: 3.3
• PS1: 2.2
• PS2: 2.4
• PS3: 2.4
• PW1: 2.4
• PW2: 3
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507995

• Blastp: Protein IQ-DOMAIN 32 from Arabidopsis with 36.6% of identity
• Blastx: Protein IQ-DOMAIN 32 from Arabidopsis with 34.25% of identity
• Eggnog: IQ-domain(ENOG410Y9MX)
• Kegg: Link to kegg annotations (AT1G19870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415289.1)
• Pfam: Protein of unknown function (DUF4005) (PF13178.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;