Id Trinity | TRINITY_DN48178_c2_g4_i1 |
---|---|
Name Transcript | Ll_transcript_507981 |
Sequence | CAAAACTTTAACTTATCAGCTCTTATAATGGCAGTGAGCATAGATTTAAATTTAGAGCAAGGATCTGATATATTATAATAATAAGACGGACTTGAAAGCT AAATGAATAAGCTAGATTTAAGGAGTGTGTTGAGGTCCGTGTTTTTTAAGCTTAATGCACTTTGACAGCAGAAGAGAGAGAGAAACAGAGAGTGAAGTGT GAGAAGGGAAGAGCTATGGTGAAATCTAACTCCTGCTTCAAATTAATCGTATGTGGCGCTAATTCTGCTGAAAAAGATGGTTACCAAGAATTAGATACCG AGATCAAGGATTCTAATGACAAACGTGGTTGGAGTTTCCAGAAGAGATCTGAAAGGCATCATGTGCTTAGCAATATTGTGATAACAGAGACCCCATCTTC TGTAAATAAGGAGAGTTCAGAATGTACAAGTATTAGTTGTCAACCACGGGCAGAATCTAATGTTGTAGAGAAGATCTACACATCAAATTTCTCAGATGAG AAGCTCCAGTTGTCCTCGTTAGCAAGCTCTCAAATGTCAGAAACGATTGTCACTGAAACTGAAAGTGAGGTGGCTGTCAATAAACCAGAGTCTGTTGTTA TCATCATCCAGGCTGCCATTAGAGGTTTCTTGGCTCAAAGAGAACTTCTAAAAAGTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACTTGGT CAGGCAGCATGCTGTAGGAACACTACGTTGTGTTCAAGCTATTGTTAAAATGCAAGTCCTTGTGCGAGTTCGTCGTGCTCAGCAATCACATTCAAGAAAT CATTTAAAGCACAAGGATGGCAAAAATGATTGCTCAAAAACTTCGGTATTGTTTATTTAAATTATTGATTATTGATAGCAGATGCCTTGCTCACTGGTTA ACCAGTTCAAATGGTTGCTTGCTTAACAGTTACTAATTTCATTCTACAATTCATTGTTGTATTTTGCAATGCTTGCGTTGTATTATGATTATCACGAATA ATTCCTTAGTTGATGAGAATGTCAACATTTTTGCTGAACAGAACTGAACATATTTACCTTGAGGGATGAAAATACTGCTTGAAGCTTTTAAATCTTTTTC ATATTTCTTAAAATATTGAGAAGTCATTACCATTACTTGAATCTAAGATCTCTAACCAACTCCCGACTCACCCTATCCACTTGAACTGAGCACATGTTGT CGAGTCTCTGGAATCTAATGTAGAAACCTTTAGTGGGTTTTTTGTTGTTGATAAGCGTGGGTTTTCCTCTTTAGTTTTGGGTCTCCTTCAAGTATAATTG TATGGACCAGCTCTGTTCACCTGGTCTGATCGGATAACCTATGATCTGGGCACCTGGCCTCTGGGCTGATCCTCGGTTACAATGAATTTTCTAAGCAACC TGGTCAAACCTAGGTGACCTGCCAATTTTCCCGGGTGGCTTGACCCTGTTCAGTGTCACTAGGTTTTTTATTATTTAAAATCAAAGACACTTTATATTGA AAACATAGAAGTCACTGCCAGAGTAATGTCTAATTTATATTATAAAGGGCAGCCCATTGCACTCCCACCTATTGGAATCTGAGGAGGGTAGATGTACATT GTCTTACCCTTGCAAGCAAAAAACTATTTCCATGATTTGAACGCATGACTTATAGGTCACAAGGCAAATAACCTTGTCATTGCGCTGAAGCTCACCTTGT ATTAATTTATATTATGATTGAACAAATTTGATTTTAGAATATTGGACCTGTATAGTTTATCAGTGCTAATTTGGTCACGTCATGAATACTATTTTCCATA TGATGTATTTTTTATACCATTTTTTGTATAAAGTACCTTTTCATATAGTATTTTTATTAAGAAGAATATTTTACTCTTTGTCTAGGTTTTCCGGTTCAAC TGCTTAACCAGCAGTCAGACCGCTGACTTGTTGACCTATCCTTCTAACCGGGTCAAGTTCTGGTCTGTTTTACACAACTACGTTGTCCAGTAAGCAATCT AAAATGTTCAGCAAAATGAAACATTGTTCCATCCATGACTATGTACACAAGTCTATTATAGTGAGTTATGAGAACATGATGATCAGATGTGGTACTAATC TCTGACAGTGGCTAGTAATCAAAGGTGTTTTATGTGGAAGGTAGACCTGTAAAACAAACAAAACTTTCTGTTCTTGGAGTATGAAGCTGATATGTGCACT TCTCATTCATGACAAAAAAATATGCAAGCTGTAAACTCATTTAGTCACAAAAATGTTTCTATATTTTTGTTTCTCTAAAGACCTCTACATTTTTTCTGCT TTTTTCTCTTTTAGTTGTGGGTTGAACTCTTGCCTGGGATTGTGATAAATGTTTTCACTTAGGAGATCCATTATCACATTTGTAAATTTTGTCTTGCTGT GAAATAGATGTGCTGTGAGCCTGGTCTAAGTGTGCCGGTTTAATTTTGCTATGGTTTAGGGTACTGAACATGATGTGACCAAATCAAATGTGACGTACAC TTCAATTGAGAGGCTTCTCAGTAACAGCTTTGCTCGTCAGCTGCTGGATTCAACTCCAAAAAACAAGCCTATCCATGTCAAATGCGATCCTTCTAAAGCT GATGGTCCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTTATCATCAGATTCTGCAGAGTACAACAAACCAATTTCCATATCAGAGCAATCAGATG CGACCAAAGATAGCGGCACATCTTTGTCTCAATTTGGGGCAGTTATTCCATCAGAAGTTTTTCTTCAGTCATCTGACTCAAAACACACTGTTGAGTATTC ATCTCTGCCTTCTACAGATGAAGAGAAGTCGGCTACCTATGATGCTAATAACTTCAACTTTCAAGCTGGCTCCTTTGCATCATGTCTTGTAAAAGATAAC TCAGAACAGGCTCCTCCTGAAAGGATGATTATGCATGATGCTAAAGTAACCACAACTGAAATTGATTCTTTGCAAAATGAAGAATCGGAATCAGATGCAA GTGTCCCAGAAGAGCCTAGTTTTCTTTGTCAGAAGCCTGAAATTGATGATGAACAGTGCAAACTATCTACAAAAAGATCTGCCTCAGACCAGCATGAGGC TGGAGGAAAGAAAATTGGAGATGTAGCTAGGAAGTTCAGTAACCCTGCATTTATCGCGTCACAATCAAAATTTGAAGAGTTTACTTCTATGGCAAATTCA GGTAGGCCAGGCAGTTTGTCAAACCAGGGAGCACAGGTTGAATCAGAAGCAAACACCTCTTCCGTTGCAACAGATACTACATACAGATCAAAAGAGTTCT CATCTGGGAATTCTGCTCCATATCCTTCTAGAACTGGTGGTTCTGAATGTGGTACTGAAATATCAATTTCTTCCACTCTTGATTCACCTGATAGATTAGA GGCTGGGGCAGTGAAAAGTGAACATGACGCCCAAGGTCTACTAGAAGGGATAGGTAATTCTGAAAAGAAGATAGATCACAGTGTTGAGACCAATTTTCTT TCTGCCACTTTGACTTCTAGCCTAATTAACTCTAATTTGGATCAAACGGAGATTGTTGGTGATGTCAGCGGCGATATGGTTCATTCAGTGGCAATGAGGG ACTCCAAAGAGCCTGTTGTCCAGTTTGAGAAAAATGCACCTGACCTATTGAGAGAACAAGCAGGGTCTGTTCTGCAAGATTTCAAGTTATCTCCAGAAGC TTCACAAAGAAGCCAGATGACCATCACCGAATCACAAGGAACACCTTCAAGTCAGGTATCAGTTAAACCTAAAGAGAGTAAAGTCAGCAAGACTGGGTCT AGCCATAAACGTAGGATCCTGTCCGGGGGTAACAAATCTCCTTCAAATGCAAATCATGATTCTGTCTCAAGAGGTAGTAGGGAACAGTTGGCTAAAGATC AGACGAGTGGAAAGAGGCGCAATTCTTTCAGCTCAGTAAAACATGATCACATTGATCAAGAACTTAGAGACAATGGAAGTAATGATAGTTCTCTTCCCCG TTTCATGCAAGCTACAAAATCTGCTAGGGCAAAGCTAAGTGCAAATAACTCTCCAAGATCAACTCCTGATTCGCGTGAGCGTGACCAAGATGTCCATGTT AAGAGACATTCCTTACCCGGTGCAACTGGCAGGCAGGGATCTCCAGGCACAAAGGGAAATGTCGTAAATGCTCTTTATGAGAGAAAATGGCAGAGGTGAA TTGACAGACACATGGCAGAATGTGCTCACATTCCTCTACAATGGTTGATGATGAGTCCTGGAGTGGCACCTTGGTAATTTGTAGCTCTGATTACATTTAC TAATAAGGACAACCACTCAGTTTTATTTGTTAACTTTATGGACTCTTTTTGTTTGTATTCTTCCCTTCCCCCATATTTTTTCCTGGTGGAATGTTGTTGT GACAATAGGATTTGTGTGGATCATACATATATAGAAGCGAGTGAGGATTATGCTTACATTGTTGTTCTCCTCAATGTTATCATCATTGCATTCTCAATAG GATACTATTTATATGTTTAAGACAATTTGTCACTTCATGTTTGTTGAAAGCTATATTTGCTTGAAGCGTTAGCGTCTACAGATTTTTCATAGGCATTGCT GGAAGTGTTTTTTACATCAGCACTATTTTTGCATCAGTAAAACTATTTCACCCCTTTTATTTTGCACTCATTGTACAGTTCTTCCCTCTATTGTGAAAAT TTATGAAATAAGATGTATTGTGATCAGATAAGATCTTAGTTTGCACTAAGCTGTGTTGATAATCTAGCATCGATTAGAATCTAAAACAATCAAAACAAGT AAAAATCAAAATAAGTTTATCATATTCTCATAAATTTAGTTACTCACCA BLAST |
Tissue | pods |
Gene name | LI_gene_158785; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507981
Blastp | Protein IQ-DOMAIN 32 from Arabidopsis with 33.99% of identity |
---|---|
Blastx | Protein IQ-DOMAIN 32 from Arabidopsis with 33.33% of identity |
Eggnog | IQ-domain(ENOG410Y9MX) |
Kegg | Link to kegg annotations (AT1G19870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458503.1) |
Pfam | Protein of unknown function (DUF4005) (PF13178.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |