Ll_transcript_507985

• Id Trinity: TRINITY_DN48178_c2_g4_i2
• Name Transcript: Ll_transcript_507985
• Sequence: CAAAACTTTAACTTATCAGCTCTTATAATGGCAGTGAGCATAGATTTAAATTTAGAGCAAGGATCTGATATATTATAATAATAAGACGGACTTGAAAGCT AAATGAATAAGCTAGATTTAAGGAGTGTGTTGAGGTCCGTGTTTTTTAAGCTTAATGCACTTTGACAGCAGAAGAGAGAGAGAAACAGAGAGTGAAGTGT GAGAAGGGAAGAGCTATGGTGAAATCTAACTCCTGCTTCAAATTAATCGTATGTGGCGCTAATTCTGCTGAAAAAGATGGTTACCAAGAATTAGATACCG AGATCAAGGATTCTAATGACAAACGTGGTTGGAGTTTCCAGAAGAGATCTGAAAGGCATCATGTGCTTAGCAATATTGTGATAACAGAGACCCCATCTTC TGTAAATAAGGAGAGTTCAGAATGTACAAGTATTAGTTGTCAACCACGGGCAGAATCTAATGTTGTAGAGAAGATCTACACATCAAATTTCTCAGATGAG AAGCTCCAGTTGTCCTCGTTAGCAAGCTCTCAAATGTCAGAAACGATTGTCACTGAAACTGAAAGTGAGGTGGCTGTCAATAAACCAGAGTCTGTTGTTA TCATCATCCAGGCTGCCATTAGAGGTTTCTTGGCTCAAAGAGAACTTCTAAAAAGTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACTTGGT CAGGCAGCATGCTGTAGGAACACTACGTTGTGTTCAAGCTATTGTTAAAATGCAAGTCCTTGTGCGAGTTCGTCGTGCTCAGCAATCACATTCAAGAAAT CATTTAAAGCACAAGGATGGCAAAAATGATTGCTCAAAAACTTCGGTATTGTTTATTTAAATTATTGATTATTGATAGCAGATGCCTTGCTCACTGGTTA ACCAGTTCAAATGGTTGCTTGCTTAACAGTTACTAATTTCATTCTACAATTCATTGTTGTATTTTGCAATGCTTGCGTTGTATTATGATTATCACGAATA ATTCCTTAGTTGATGAGAATGTCAACATTTTTGCTGAACAGAACTGAACATATTTACCTTGAGGGATGAAAATACTGCTTGAAGCTTTTAAATCTTTTTC ATATTTCTTAAAATATTGAGAAGTCATTACCATTACTTGAATCTAAGATCTCTAACCAACTCCCGACTCACCCTATCCACTTGAACTGAGCACATGTTGT CGAGTCTCTGGAATCTAATGTAGAAACCTTTAGTGGGTTTTTTGTTGTTGATAAGCGTGGGTTTTCCTCTTTAGTTTTGGGTCTCCTTCAAGTATAATTG TATGGACCAGCTCTGTTCACCTGGTCTGATCGGATAACCTATGATCTGGGCACCTGGCCTCTGGGCTGATCCTCGGTTACAATGAATTTTCTAAGCAACC TGGTCAAACCTAGGTGACCTGCCAATTTTCCCGGGTGGCTTGACCCTGTTCAGTGTCACTAGGTTTTTTATTATTTAAAATCAAAGACACTTTATATTGA AAACATAGAAGTCACTGCCAGAGTAATGTCTAATTTATATTATAAAGGGCAGCCCATTGCACTCCCACCTATTGGAATCTGAGGAGGGTAGATGTACATT GTCTTACCCTTGCAAGCAAAAAACTATTTCCATGATTTGAACGCATGACTTATAGGTCACAAGGCAAATAACCTTGTCATTGCGCTGAAGCTCACCTTGT ATTAATTTATATTATGATTGAACAAATTTGATTTTAGAATATTGGACCTGTATAGTTTATCAGTGCTAATTTGGTCACGTCATGAATACTATTTTCCATA TGATGTATTTTTTATACCATTTTTTGTATAAAGTACCTTTTCATATAGTATTTTTATTAAGAAGAATATTTTACTCTTTGTCTAGGTTTTCCGGTTCAAC TGCTTAACCAGCAGTCAGACCGCTGACTTGTTGACCTATCCTTCTAACCGGGTCAAGTTCTGGTCTGTTTTACACAACTACGTTGTCCAGTAAGCAATCT AAAATGTTCAGCAAAATGAAACATTGTTCCATCCATGACTATGTACACAAGTCTATTATAGTGAGTTATGAGAACATGATGATCAGATGTGGTACTAATC TCTGACAGTGGCTAGTAATCAAAGGTGTTTTATGTGGAAGGGTACTGAACATGATGTGACCAAATCAAATGTGACGTACACTTCAATTGAGAGGCTTCTC AGTAACAGCTTTGCTCGTCAGCTGCTGGATTCAACTCCAAAAAACAAGCCTATCCATGTCAAATGCGATCCTTCTAAAGCTGATGGTCCTGCTTGGAAAT GGTTGGAGAGATGGATGTCTGTTTTATCATCAGATTCTGCAGAGTACAACAAACCAATTTCCATATCAGAGCAATCAGATGCGACCAAAGATAGCGGCAC ATCTTTGTCTCAATTTGGGGCAGTTATTCCATCAGAAGTTTTTCTTCAGTCATCTGACTCAAAACACACTGTTGAGTATTCATCTCTGCCTTCTACAGAT GAAGAGAAGTCGGCTACCTATGATGCTAATAACTTCAACTTTCAAGCTGGCTCCTTTGCATCATGTCTTGTAAAAGATAACTCAGAACAGGCTCCTCCTG AAAGGATGATTATGCATGATGCTAAAGTAACCACAACTGAAATTGATTCTTTGCAAAATGAAGAATCGGAATCAGATGCAAGTGTCCCAGAAGAGCCTAG TTTTCTTTGTCAGAAGCCTGAAATTGATGATGAACAGTGCAAACTATCTACAAAAAGATCTGCCTCAGACCAGCATGAGGCTGGAGGAAAGAAAATTGGA GATGTAGCTAGGAAGTTCAGTAACCCTGCATTTATCGCGTCACAATCAAAATTTGAAGAGTTTACTTCTATGGCAAATTCAGGTAGGCCAGGCAGTTTGT CAAACCAGGGAGCACAGGTTGAATCAGAAGCAAACACCTCTTCCGTTGCAACAGATACTACATACAGATCAAAAGAGTTCTCATCTGGGAATTCTGCTCC ATATCCTTCTAGAACTGGTGGTTCTGAATGTGGTACTGAAATATCAATTTCTTCCACTCTTGATTCACCTGATAGATTAGAGGCTGGGGCAGTGAAAAGT GAACATGACGCCCAAGGTCTACTAGAAGGGATAGGTAATTCTGAAAAGAAGATAGATCACAGTGTTGAGACCAATTTTCTTTCTGCCACTTTGACTTCTA GCCTAATTAACTCTAATTTGGATCAAACGGAGATTGTTGGTGATGTCAGCGGCGATATGGTTCATTCAGTGGCAATGAGGGACTCCAAAGAGCCTGTTGT CCAGTTTGAGAAAAATGCACCTGACCTATTGAGAGAACAAGCAGGGTCTGTTCTGCAAGATTTCAAGTTATCTCCAGAAGCTTCACAAAGAAGCCAGATG ACCATCACCGAATCACAAGGAACACCTTCAAGTCAGGTATCAGTTAAACCTAAAGAGAGTAAAGTCAGCAAGACTGGGTCTAGCCATAAACGTAGGATCC TGTCCGGGGGTAACAAATCTCCTTCAAATGCAAATCATGATTCTGTCTCAAGAGGTAGTAGGGAACAGTTGGCTAAAGATCAGACGAGTGGAAAGAGGCG CAATTCTTTCAGCTCAGTAAAACATGATCACATTGATCAAGAACTTAGAGACAATGGAAGTAATGATAGTTCTCTTCCCCGTTTCATGCAAGCTACAAAA TCTGCTAGGGCAAAGCTAAGTGCAAATAACTCTCCAAGATCAACTCCTGATTCGCGTGAGCGTGACCAAGATGTCCATGTTAAGAGACATTCCTTACCCG GTGCAACTGGCAGGCAGGGATCTCCAGGCACAAAGGGAAATGTCGTAAATGCTCTTTATGAGAGAAAATGGCAGAGGTGAATTGACAGACACATGGCAGA ATGTGCTCACATTCCTCTACAATGGTTGATGATGAGTCCTGGAGTGGCACCTTGGTAATTTGTAGCTCTGATTACATTTACTAATAAGGACAACCACTCA GTTTTATTTGTTAACTTTATGGACTCTTTTTGTTTGTATTCTTCCCTTCCCCCATATTTTTTCCTGGTGGAATGTTGTTGTGACAATAGGATTTGTGTGG ATCATACATATATAGAAGCGAGTGAGGATTATGCTTACATTGTTGTTCTCCTCAATGTTATCATCATTGCATTCTCAATAGGATACTATTTATATGTTTA AGACAATTTGTCACTTCATGTTTGTTGAAAGCTATATTTGCTTGAAGCGTTAGCGTCTACAGATTTTTCATAGGCATTGCTGGAAGTGTTTTTTACATCA GCACTATTTTTGCATCAGTAAAACTATTTCACCCCTTTTATTTTGCACTCATTGTACAGTTCTTCCCTCTATTGTGAAAATTTATGAAATAAGATGTATT GTGATCAGATAAGATCTTAGTTTGCACTAAGCTGTGTTGATAATCTAGCATCGATTAGAATCTAAAACAATCAAAACAAGTAAAAATCAAAATAAGTTTA TCATATTCTCATAAATTTAGTTACTCACCA
• Tissue: pods
• Gene name: LI_gene_158785;
• Additional information: details;

Expression of Ll_transcript_507985

FPKM

• PAB: 0
• PNAB: 1
• PS1: 0.2
• PS2: 0.3
• PS3: 0.5
• PW1: 0.4
• PW2: 0.3
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507985

• Blastp: Protein IQ-DOMAIN 32 from Arabidopsis with 33.51% of identity
• Blastx: Protein IQ-DOMAIN 32 from Arabidopsis with 33.33% of identity
• Eggnog: IQ-domain(ENOG410Y9MX)
• Kegg: Link to kegg annotations (AT1G19870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458503.1)
• Pfam: Protein of unknown function (DUF4005) (PF13178.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;