| Id Trinity | TRINITY_DN48178_c2_g7_i2 |
|---|---|
| Name Transcript | Ll_transcript_507999 |
| Sequence | CACGGGTAACCATGAGTCGTTTTTTTTTTTTTACATCCCTCCTTGTACTTACCCTATAAACTAGACAGAATCTTCATTTGCTTCAGCAACATTTGAAGTG CAAAGAGAGAAAGCAGAAGCATGAAGCATTGGTGGTTCTTTCAAGTTCTCTTAGTTGTGTCTGTGACACTAGAGAGAGGGATCCATGTGGAAGCAGCAGA AGAAGGGTTTGTGAAAGCAAGAGGAGTGCAACTTATGCTGAATGGAAGCCCCTACTATGCAAATGGTTTTAATGCATATTGGCTAATGTATGTTGCATCT GATCCATCTCAGAGAAACAAAGTTACATCAACTTTTCAAGAAGCTGCAAATCATGGCCTTAACATAGCTAGAACTTGGGCTTTCAGTGATGGTGGTTATA AACCACTACAAAATTCTCCTGGATCCTACAATGAAGAAATGTTTCAGGGGTTGGACTTTGCAATAGCTGAAGCCAGAAAATATGGGATCAAACTAGTTTT GAGTTTGGTGAATAATTATGAGAGTTTAGGAGGAAAGAAACAATATGTAGATTGGGCAAGGAGTCAGGGCCAGTACTCAATTAATTCTGAAGATGATTTC TTCACAAATTCTGTAGTCAAGGGATACTACAAAAACCACATCAAGAGTGTACTTACAAGGCAGAATAGCCTTACCGGTGTTGCTTACAAAGATGACCCAA CTATAATGGCTTGGGAGTTAATGAATGAGATCAGGTGCCCTTCTGATCAATCGGGAAACACAGTTCAGGTATAACTATTCTTCACTTGCTCAATTTTATT CCTATCTTTTTATTATTTATGTTCCAAATTTGAGTTATGGTCACTATATTTAGACATACAAGGACAAATACTTGATGATTCATATGAAGTTAATAATAAG AAGAAAAATATTGAGTAGGAATGAGTCGGGGTCGGGTTTGTACATAGCCAAACTCGAACCCAAAATTCAAAACCTGAATCCGAACTCAACGGGTTTAAAA ATAGAGATACCATCCCCGAACCCGAAAAAACCCGAAAATTATTAATGTAACAAGGAAAATATGATATTATTTTCATTCATTTTTCTCTAACATTTTTATT TTCTCTTGTAATATATTATTTATTTGATGTTTGAAGATCCAATATTATATAAAGTAAAATTAGAAATGAACAATGGACAAATGATAAAAATTTCAAGTTT ATATTGAATTATATTGCTTCGGGGCAGGTTTGGGTTTGGGTATTTGTTATACCAAACCCGAACCCTAAAATTATGTCCGGGTAAAACCCGAATCCGAACC CAATCACATCGGGTTTTTCCCGTTAAATTCGGGTTCGGTTCGGGCGGGTACCCAAAAGCTCGATTTTCATTATCATCCCTAATATTGAGTGCTTCATGCT CACTAAAAAGGGAAGTGTTCATGAGTATGGTTAATGAATCAAATATAGAAACTTTAGATTACAAAGATGATTGTTTTAAATGCATAATCTAAAACATTTG ATTTTTAGTGTATTATTTATATTTTTGGATTCCTTAGCACGTGTCCCATTAACATAATCCAATTGGGTTTATTCAAGTGTGAAGTCTCACATTGAACGAG ATTATAAATATGAAAGATTCATTCAACTAATGCCTTAAAGTTTTAGTTCAAGACATGATGTTTCACTTGTGACTCTCAACTTTTTCCATACCCGGCAACA ATGGATTACTTTTAGTAAATATATTTTTGACACATGGGTAGAGATTAATCTGAGTTCCCTTCAATTCTTGCAGGGTTGGATTACTGAAATGGCATCTTAC TTGAAATCCATAGATGGAAACCACTTGCTAGAAGCTGGTCTAGAGGGTTTCTATGGCCAATCAAAGCAAGACTCTAATCCCAACTTCAGAGTAGGGACAG ATTTCATTGCAAATAATCAAATCCCTGGCATTGATTTTGCAACAATTCACTCCTACCCTGATCAATGGTACTACCAAAAAAAAAGAATGATATGCATTCA TGCTAGCTATGTTCTAATATCTAACGATGTTATTTGTATTAGTCCAAATGTTGTTTTTATTGATAATGCTGAATTGATTGGTTTACTTTCTATGATCAGG TTAACAAGTTCAAGTTATGAAGACCAAATCTCATTCTTAGGCAAGTGGCTCAATGAGCACATCCAAGATGCACAAAACATCCTTCACAAGCCACTTCTGT TTGCAGAGTTTGGGATTTCATCAAAAAACCTCGGTTCAAACTCGGCACCTAGGGACCGGTTTTTCAATACGGTCTATTCTGCGATATATTCATCTGCAAG TGGCGGCGGGGCGGCTGTTGGTGGCTTATTTTGGCAACTTCTAGCTGAAGGAATGGACTCTTTTCGCGATGGATACGAGGTGGTTTTAGGCGAGAGTCCC TCAACAGATACTTTGATTGCTCAAAACTCTCAAAAGCTAATCCGAATTCGGAAGATGTATGCTAGACTGAGAAACATTGAGAAGTGGAATAAAGCAAGAG AAAATAGAGACTCTGATGAAGGCAGAAACTGAAGCATTCATACAAGTCTCACATGGCATAATATATATTATAAATATATAACAGTAGAAACTTTGTAACC TCATATGTGTAAGGATTGATTACAGTGTAACAAGTGAGATGACCTATAAATGGTAGTATTAGAGGTATAATTCTCATCAGCATATGGCAGAAATAAGCCA TAGCCATTACTTATTCAGAACCTAAGAGTTCTTATATGGAAAGTAACTTGTATAATATACAAATAAGCATTTCATCTGTGCTTTTTTTGCTGTAGTTTGT TAGTTTGAAGTGCACCATATAACTGTTCGATCTTTAATGGTTGCACCTAACTTAGAAACATTCTGTGAAGTCAATATAATTACATTAGCAGAGAAGTGTA GATAACAAATAACAATAGTCAATATCATCTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158788; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507999
| Blastp | Mannan endo-1,4-beta-mannosidase 7 from Arabidopsis with 72.49% of identity |
|---|---|
| Blastx | Mannan endo-1,4-beta-mannosidase 7 from Arabidopsis with 72.87% of identity |
| Eggnog | Mannan endo-1,4-beta-mannosidase(COG3934) |
| Kegg | Link to kegg annotations (AT5G66460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432491.1) |
| Pfam | Cellulase (glycosyl hydrolase family 5) (PF00150.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |