Ll_transcript_508635

• Id Trinity: TRINITY_DN48180_c5_g2_i1
• Name Transcript: Ll_transcript_508635
• Sequence: GTCCAATCCTTCTATCTATTCTCTTTCTTTCTTTCTCTCATCATCAACAACAACAACAACAAAAGGCAAAGAAACATAGTAAAAAAAGAAAAGTAGACAC AGTTTTTTCATGGCTGTTCAAGCTCAATATCCATCCAATGTCATTTTTTTAAACAGAAATGGTCAAGAAGAAAATGATTGCTCATTACAACAACCACAAT CAAAAGGAGGATACACTCCATACAACAACAACAATGGAAGTGCTAATTCTCGCAAGAGAGGAAGGGAAGCTATTGTAGCCAATACAACGCCTAATAATAT AATGAATCCATTATTCTCAATGCAATCACATCCTCCACAGCTTATAGACCTCTCTCAACTCCATAATCAACACCAAAATGTGGCTTCTATAGGCTTAGGC TTATCTTTTGGTAACCAACAACAACAAAGATTACAACTTCAACAACAACAACAACATGGGAGTCACATATCCTCCTACTTATCTTTATCTTCTGAACGAT TTTCTTTACAAATAAAACAAGAAATGGATGAAATTGATCACTTTCTTCATGTTCTGGGAGAGGATTTAAAGAGTACATTGGCGGCCAAGAGCCAAAGACA TGACAAGGAGCTGCTACGTGCTGCGGAGGAGGCGGTGGCGCGTCGATTGAGAGAAATGGAAGGTGAGGTGGACAAAGCCACTCGTCGAAACGCGGAGCTA GAGGCACGCGCCGCCCAGCTGAGCTCGGAGGCGCAGCTGTGGCAGGCCAAAGCAAGGGCGCATGAGGCGGCGGCGACGTCGTTACAAGTCCAACTTCAGC AGACAATGATAGCCACCGGAGCCGGTAGATGTCACGGTGGAGATGAAGGTGGCGCAGGGTTATCATGTGCCTTGGATGGGGGTCAGGTGGAGGATGCTGA GTCTGCGTATATAGACCCGGACAGGGTTGAAGTGATCACATCTGCGGCGGCGCGTGCAAAATGTAGGGGATGCGGGAAGCGCGTGGCCTCGGTGTTGGTG TTGCCGTGTAGACACTTGTGCATGTGTGCAGGATGTGATGCGCATTTTAGAGCCTGTCCAGTTTGCCTTACTCTCAAGGATTCAACCGTTCAAGTCCATC TCTGTTAAAGGGTACCCCACAAGGAATTACCTTACCAGTGCCCTCCAAAAAGGCACCACCAAAAAAACTAGTACAGAAAAAACTGAAGATTCTGCTATAA AAAATTATTAATATAAAATTACGTTTTTGTTTCTCTCTGTTTTTTTATCTTAAATGAAGGGAAGAAGTTCGGTGAGTCTGACAATCTGGTCCTCTTGAAA TAACCTTCAGATGGGCCATGGTGGCATTGTTAATTACTCATTTTAAAAAGTTTTTTTTTGTTGTTTTTTTGCTTTTGAAAATCTATTGAGTTAGTTTAAT TTATATTAGAAATTTATAATTTTTAATTAAGGTCACATATTT
• Tissue: pods
• Gene name: LI_gene_158814;
• Additional information: details;

Expression of Ll_transcript_508635

FPKM

• PAB: 1.2
• PNAB: 5.6
• PS1: 3
• PS2: 3.5
• PS3: 5.7
• PW1: 6.2
• PW2: 4.9
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508635

• Blastp: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 31.58% of identity
• Blastx: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 32% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT5G45100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430489.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;