| Id Trinity | TRINITY_DN48180_c5_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_508648 |
| Sequence | GTCCAATCCTTCTATCTATTCTCTTTCTTTCTTTCTCTCATCATCAACAACAACAACAACAAAAGGCAAAGAAACATAGTAAAAAAAGAAAAGTAGACAC AGTTTTTTCATGGCTGTTCAAGCTCAATATCCATCCAATGTCATTTTTTTAAACAGAAATGGTCAAGAAGAAAATGATTGCTCATTACAACAACCACAAT CAAAAGGAGGATACACTCCATACAACAACAACAATGGAAGTGTGCTTTCTTATTTTCATTCCCTCATTCTATAATCTTATTCTATACATCAATTTGGATC ATATAAAGAATATGCTAATTTCATATACTTCATTGTCAGGTGCTAATTCTCGCAAGAGAGGAAGGGAAGCTATTGTAGCCAATACAACGCCTAATAATAT AATGAATCCATTATTCTCAATGCAATCACATCCTCCACAGCTTATAGACCTCTCTCAACTCCATAATCAACACCAAAATGTGGCTTCTATAGGCTTAGGC TTATCTTTTGGTAACCAACAACAACAAAGATTACAACTTCAACAACAACAACAACATGGGAGTCACATATCCTCCTACTTATCTTTATCTTCTGAACGAT TTTCTTTACAAATAAAACAAGAAATGGATGAAATTGATCACTTTCTTCATGTTCTGGGAGAGGATTTAAAGAGTACATTGGCGGCCAAGAGCCAAAGACA TGACAAGGAGCTGCTACGTGCTGCGGAGGAGGCGGTGGCGCGTCGATTGAGAGAAATGGAAGGTGAGGTGGACAAAGCCACTCGTCGAAACGCGGAGCTA GAGGCACGCGCCGCCCAGCTGAGCTCGGAGGCGCAGCTGTGGCAGGCCAAAGCAAGGGCGCATGAGGCGGCGGCGACGTCGTTACAAGTCCAACTTCAGC AGACAATGATAGCCACCGGAGCCGGTAGATGTCACGGTGGAGATGAAGGTGGCGCAGGGTTATCATGTGCCTTGGATGGGGGTCAGGTGGAGGATGCTGA GTCTGCGTATATAGACCCGGACAGGGTTGAAGTGATCACATCTGCGGCGGCGCGTGCAAAATGTAGGGGATGCGGGAAGCGCGTGGCCTCGGTGTTGGTG TTGCCGTGTAGACACTTGTGCATGTGTGCAGGATGTGATGCGCATTTTAGAGCCTGTCCAGTTTGCCTTACTCTCAAGGATTCAACCGTTCAAGTCCATC TCTGTTAAAGGGTACCCCACAAGGAATTACCTTACCAGTGCCCTCCAAAAAGGCACCACCAAAAAAACTAGTACAGAAAAAACTGAAGATTCTGCTATAA AAAATTATTAATATAAAATTACGTTTTTGTTTCTCTCTGTTTTTTTATCTTAAATGAAGGGAAGAAGTTCGGTGAGTCTGACAATCTGGTCCTCTTGAAA TAACCTTCAGATGGGCCATGGTGGCATTGTTAATTACTCATTTTAAAAAGTTTTTTTTTGTTGTTTTTTTGCTTTTGAAAATCTATTGAGTTAGTTTAAT TTATATTAGAAATTTATAATTTTTAATTAAGGTCACATATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158814; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508648
| Blastp | BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 32% of identity |
|---|---|
| Blastx | BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 32% of identity |
| Eggnog | protein binding zinc ion binding(ENOG4111S1X) |
| Kegg | Link to kegg annotations (AT5G45100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430489.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |