Ll_transcript_508656

• Id Trinity: TRINITY_DN48180_c5_g2_i17
• Name Transcript: Ll_transcript_508656
• Sequence: GAAACATTGAATGATACACATCCTACATCCTGCTTAATAAATATACCTTATATCTACATAAGCCTTGAGAGTTATATAAGTGTATGAGAACTTCAGAATC ATTTTAGTATCATAGCACCCAAATTTTCCTCTCCCCCATTCTCCTTGAAAAAATCTAACTCCGAAACCAACATCAGAAAGAGAAAGTGCGAGCAGAATAA GGAGCCACTCTTTTTCTCTCTACAAAACAAAGGCAAAGAAACATAAGAAGAAAAAGAAAGACTAGCATATATAGAAGGTGCTACAAGAAACACAACTTTT CATGGCTGTTCAAGCTCAATATCCACCCAATATTCTTCTCCTAAACAGAAATGGTCAAGAAGGAAATGATTACTCATTACAACAAACACAATCAAAAGTT GAACTCCTCGACCAATCCCAAAGTTTATACAACAATGAAAATGCTAATTCTCGCAAAAGAGGAAGAGATGCTATTGTAACCAACCCATCTCCTAATAATA TTATGAACCCATTGTTCTCTATGCAACCACATCCTCTAAAGTTCATTGAGCTCTCTCAACTCCATAATCAACACCAAAATGTGGTTTCGACAGGCTTAGG CTTATCTTTTGGTGACCAACAAAAACAAAGATTACAACTTCATCAACAACAACATGGGTGTAACTCATCTTCTTCCTTATCTTTGTTGTCTGAAGGATTT TCTTCACAGATGAAACAGAAAAGAGATGAATTTGATATTTTCCTTCATGCTCAGGGAGAGGAATTAATGTGTACATTGGCCGAGAAAATGCAAAGGCATT ACCAAGAGCTGCTGCGCAAGGCGGAGGACGCGGTGGCGCGTCGACTTAGAGAAAAGGAAGCAGAAATGGAGAAGGCCATGCGCCGGAACGCGGAGCTAGA GGCACGCGCCGCCCAGCTGAGCGCGGAGGCGCAGGTGTGGCAGGCCAGGGCAATGACACAGGAGGCGGCGGCAGCATCGTTACAAGCCCAACTGCAGCAT ACAATGACGGCCGCCGGATGTCGCGGTGGAGATGATGGCGGCGCAGGGTTGTCATTCGCCATGGATGGGGGCCAGGCGGAGGATGCTGAGTCGGCTTATA TTGATCCGGACAGGGTGGAAGTTGTGGCGACAGTGGCGGCGCGTGCAAAATGTAAGGGGTGTGGGAAGCGCGTGGCATCAGTTGTGGTATTGCCTTGTAG ACACTTGTGTATTTGTGCAGAATGTGATTCACGTCTTAGAGCATGCCCAGTTTGCCTTACTCTAAAGAATTCAACCGTTGAAGTATATCTCTCTTGACCA GAAGCTATTACCATGCCCTCCAAAAAGCCACTACCAAAAAAGGGAAAAAAAGTGTGAGAATTGAAGATTCTGATAAAAAGTTGATATAATAAAATTACAT TTTGTTTCTCTTTTTAATTTTAAATTAATTGTAGTGGAAGAAATTTCATTTGAGTCTGACTCAACTTGAAATGGAGTTTATCTTCAGGTGATGTACATGG TCACATGGGTAGTGGCATTTTTTTTATTTTACTTTTGGAAATTTTGTTGAATTGATATAATATATTTTTTCATTTTATGAATGCCTTTGTTATAATGATA ATGACTTTCAATTTTAAAAATGTCAATGTAAAGGTTATGCATCTTTGTATATTAAAAATATCAGGAAATATGTTCTTCATTAAGGAAGAGGATTAAAGAA GAGAATCATTATTTTAAAAATATAACATATTGTTGATGTAGTTTAATATATGTATATTAGCAATGTAAAGTGATTTACA
• Tissue: pods
• Gene name: LI_gene_158814;
• Additional information: details;

Expression of Ll_transcript_508656

FPKM

• PAB: 15.9
• PNAB: 16
• PS1: 12.4
• PS2: 8.6
• PS3: 10
• PW1: 7.1
• PW2: 0.1
• PW3: 10.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508656

• Blastp: Probable BOI-related E3 ubiquitin-protein ligase 2 from Arabidopsis with 33.49% of identity
• Blastx: E3 ubiquitin-protein ligase BOI from Arabidopsis with 32.49% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT1G79110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446011.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;