Ll_transcript_510159

• Id Trinity: TRINITY_DN48182_c6_g1_i2
• Name Transcript: Ll_transcript_510159
• Sequence: ATCTAAAAAGAATCCTTAATAATTAAGTCCTCATTTGTTCATATACCCGAATCAAACATGTTGAGCGTAGCAGAATCCTAGGTCGTAGGTTATCTGACTC AGACTCCCACAATGGAACTCATCGTTGCTCCGCCGCCAACACCACCCACCCGCTATCGTTTCTTTGATGACACCTTTGATCTAAAGAACACCATCGCCAC CACCACTTCCATTACTTCTCCCAACCATCACCAACTTCACCTTCAACTCCCCCTTCGCAACCCTATACACAACAACCCTTCTCTTTTACCCAAATTCCCT TATAACCCTTCTCCCATTCCCCCTCAAATCACTCCTCGCAATAACAGCATTAGAAAGGAGACAAAAGAGGCTACAACGTTAGACATCTTGCACTTACTTG ATGCTCTCTCATTTCCCGTACCCATTGACACTTACATATCCTTGATTAAGGAGTGCACTGTTTCTAAGGACCCACGAACTGCAATTGAGTTGCTTAACCA CATCACATATAGTGGCTGTAAACCCACTTTACCGTTGCTCAATCGGATTCTCATCATGTTTGTTTCTTGTGGTCTTTTGGACAATGCTCGCCACCTGTTC GACAAAATGGCTGTGAGGGACTTCAATACTTGGGCAACCTTGTTTGTTGCTTATTTTGATGATGTTGATTACGAAGAGACCACAAGTGTGTTTATCAGCA TGATAGAAGATTTGGGTATGTTGGAATTTCCTCCATGGATATGGGATTGTCTTCTAAAGGCATGTGCTTGCAGTATGAATTTTGCATTAGGATTGCAAGT TCATGGATGGTTGTTAAAGTTGGGAAATTGTGATGATACGGTTATTAGTACCTCCTTGATCAAATTTTATGGGAGATTCAGATGTACAGGGGATGTGAAC CTTGTATTTAATCAAGTGTCACGTCATAATACCATGACTTGGACAGAAAAAATTGTGAGTGGTTGCAAGGAAAAGCAGTTCTCTGAAGCTCTTTGGGACT TCAAAGAAATGGGAAGGGAAGGGATAAAGAAGGACACCTTTACTTTCTCTAGTGTTCTTAAGGCATGTGGAAAGATGCATGATCATGGACGCTGCGGTGA GCAAGTCCATGCTGATGCCATCAAACTCGGGTTAGTAGAGGATAACTATGTGCATTGTAGTTTGATAGCCATGTATGGAAGAAGTGGGTTGTTGAACCAT GCCGAACAGGTGTTTGAGATGGCACAGGATGAAGGAAATGATGATTGTTGGAATGCCATGCTTATGGGTTACATATATAATGGTTTGCATATTGAAGCTG TTAAGTTTCTGTACCAGATGAAGGAAGCTGGAATACAGCCCCAAGAATCCTTGCTCAACAAACTGAGAATTTCTTGTGGCAGTATTGCCTTCTGAAAAAA GAATCAACTGAGAAATATTGTACATAGGCAATGTAAAAATGTTGAATGGATACTCTTTTACAGCTTGCTTGAATTAAAAACTATCCTGAAACTTGACATA TTTCCTTTTGGTTCAAACATATTAACAAAGTCCGCAAGAGTTCAAATTCTGTGGTATACATTATTTGTGGGTAATTGTAAGTATATGATGTAAGCGCTTG TTGAGTCTTGATGCACGCCCTAATCTTAGGATAGGACAATCACCCGACCAAAAAAATGGTACAAGGGGATAACTCCTGACATAGGCTTATGAACCTTGGG CCTCGAATAAAGTAGACCGAGTTACAAAATTAGTCTACTTTGGGACGAGTTTTTTAAAGTCTTTTTAAAGTCCAGTACTAAGTTTTTTTAAGGATATGGA TCATCTGTCCCAAAGTATGTCCCAAATCATGTACTAAGCCAATCAGAATGAAGAAAAATCAAATTTAAGTGACCTTTCACTATTTGCAACCATGCATGCA TTGCTCATTCACTCTTTTGCTGTTTTAGTTTTCTTGCTTACTAGCTAGTTCCTCAACTTTATTGTTTATAGATGCATATTTAAATTATTGAGTAATAATT TCTTGGAATCCTCTCTAATATTGGATTATCTGGTATCGAAATAGAGAGAAAATTAAGATAGTGTAGTTTTTAGCGGGAGCATATTTATTGTTTCACAAGT TGTAATTCGTACATGTATTATAATTAGTTGAAAAAATATTTTTAAGTTAAAAAATTAATAATTAAAA
• Tissue: pods
• Gene name: LI_gene_158835;
• Additional information: details;

Expression of Ll_transcript_510159

FPKM

• PAB: 1.4
• PNAB: 1.8
• PS1: 3.8
• PS2: 2.1
• PS3: 3.4
• PW1: 2
• PW2: 1.9
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510159

• Blastp: Pentatricopeptide repeat-containing protein At1g31790 from Arabidopsis with 42.93% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g31790 from Arabidopsis with 47.04% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G31790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420403.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;