Ll_transcript_508047

• Id Trinity: TRINITY_DN48191_c0_g4_i2
• Name Transcript: Ll_transcript_508047
• Sequence: TTTGGAGCTTGGGGTTGACATAGGATCATCAAGTGTTGCAAGAGGTGTTGTGAGTCTTGTCCTTGGGTATCTCAGCCATCTGGTTATTGAGATGGCATTT TTAGTTCAGGGAAACACACGTGAAGAGCTTCCTGAGTTTCTTCTTGGAACCTGTCGCCTTAACCATTTGGATGCTTCCAAATCAGTTTTGCTGAAGCCAT GATTTTCAATCAGACTTGTCACAAGTGGGTTTCTCAAGTTTCAAATGTATAGATTTAATTGAAATTCTATATCCTTGTCTCAATAAAATAACTTGCACTA GTAATTACTTTATTCAATTCATTTGAATCTTGCAGCTGTTTATTATGTGCTGTGGGCATTGTTAGGATGGATGATGGTATGTTCACACTACTCTTTGTAA AAATGAAAACTTTATTTCTTCATTAGAAACCACTTATGGGTCTTTTCAAGCTCCATCACATTATAAGTGAATTTCTTAATATAATAAATAGAAGTGTTAC TCACCATACAAAAGAATTAAAAAATTACATTATTAAACTATGTATTAGGATGAAGGATGAGAATCTCTCCAAAATAAAATACTAACATATTAAAATATGC TTATAAAAAAATTTATACCATTTTTTAGTATAATATGGGTATCTCAGAAAATCTAATAGAAAATCAACATTCTCTTTATTCTCTGTCCCTCAAAGCAGTA TTAACCTCAAACAAACTTGTCACCCAAATCTTTATTTTTAGATTTACTATCTTCGTTAATGTCAGTGATAACTCAACGAATTAAGTCTCTCTTACAGGAA AAATAATATATGTTGTAATAGTATATGAGTTTTATATATTGTAGTATATTATTTATTACTCATATTTAATTATCAGCAATTCTTTAAAAAAAAGTAATCT AAGTAAATGATATAGTGACTATGTATAATTTTGACGTTTACCGAATATAAATATTACTCTCTTTAAATAATTAAATAATATAAATATCTCATTGCTCAAT CACCAAATAACCATTATACTTATACCATTGACCAACTATTTTTCTTATTTTCTTTGTTCTTTCTCCTTTCTTTCCCCAGTTTTATTGGCTTGTTAATGTT TACTATTATTTATGCCTCGTGGTGGTGATATGAGAAAAAAAAAGTTGAGAATGGTTTCATATCACAATTTATATTTTTTGAAAAGCAAAGAATTTTATTC AAGAGAAGTATCAGAAGTACTACGGTCTCAATACAGTATATAATCACAAATTATGGTCATATCATCATAATTTATTTCGAATATAACATAAATTAAAGAA AACTCTTGTCAAAGTATAACATCATAAGTGAGTCAAAATTTGACATACAAATGCTGAAATTTTATAAATCATAAAAGTAATTATCAGATCAACTCTCCTA AATATTATGATACACTGTTTAAAACTTTAAATCAATTTGCAACCTTAATATTATGACAAATTATAAGAGTTAAGTTTTGTCATATTATGAAAAATAAAAT ATAAAATAATTACTTACTACTTTGGTGAAAGGTTAGAATTAACTGACCAAGAGTTAAATTACTATATTATAAGACATATATCACATTCTCATGTCTTTTG GAGAATGCATGGGTTATTTCATTTTTCATATGTAACACATGGGATTCACAAAATCTCACTGCTCAACTAGGAAAGTAGTTAATAGTTATCCAACTTATAA CAGAAACAACTCTAACTTACTTTATCTGTCTGAAACTGATTTATTGTAACATTTTTTGCAATAAAATTTATCATTTATTTATTTAACTCCTGATCCAGGA TACCCAGAAGAGTGAAAGGAAAAAAGGAATCTCATTTTTGCTTTGATCCTTGTACTTTGTCTTTATGTTTTGTCACTTCAATCCTCACACTTTATCTCTC TCTGTTTACACTGTAATGTGTTTGTGTTTTATTCCTTCACTTAAACAAACTCATCATGTCTAAGGGTGTTGCTGATATGAAGGACTTTGGGTTTTTCGGC AAGAATTTTAATGGTCTCCCTGATGAGGTTTTTAATGATATCGTCAACTTTTTCGATTTCCCTTTGGAAGATGTAGAAATTAATGTGGATGAAGACTGGG ATGCTCAGTTTAAACGGCTCGAAGAGCCATGTTTTGATGTTTTTCCTGTTGCATCATCTGGGATGTGTGGCAGAACTGAGAATAATCCACAGCTTGGGAT AAGTTTCTCAACTTCTTATAATGGCGTGTCTCAAATAAAGCAGCAGCTTGCACAAACTGCTGGACCTACATATGGAAAAACCATTTCCGACCCGAACGAC TCCATCGGAAAACATTTGCATCGATTCCAAACCACTAGTCCAGTTTCAGTTTTTGATAGTAGTAACAGTTCTTCCTCAGCTGAGAATTCCAATGTTGAAC AACCTACCATTTGTGTCAAGCGCTCTCGAAGTAAACGCCAGCGTCCTTCAAGCTCCAGTTCTGTTTTCGCAATTTCTTTCATCCCTACTTCACATGCTTT GCAAGAATATCCAGAGACTGATACAAGTCTTATGAAGTTGAGAAACAAAGTTGAGAAACAAAATGAAAAGGATCTCTTCCTTGTATCAGATCAAGTTAAG ATGAAGAGATACTCATCAAAGGACTCAGTTGTCACTAGGAAATGTATGCATTGTGAAGCGAAGAAGACGCCACAATGGCGCGAGGGACCTATGGGTCCAA AGACATTATGCAATGCGTGTGGAGTTCGATACAGGTCTGGCCGCCTCTATCCTGAATATCGGCCTGCAGTTAGCCCCACCTTCGTGCCATCATTGCATTC AAACAATCACAAGAAGGTCGTAGAGATGAGAAGCAAAGCTATGCAAGAGGCCGTTAGGGGATCGATGTTGTCGTCGTCAAGCTTTTCTAGAAATTCTGTT ATAAATGTTTAAATATATGAAAAGATTTTGTTAATCGAGTTTAAGTTAAGGTAAGCCTTACACCCCTGCTTTGTAATTGGATGTAGTCTCTCCGTATATG GTCTAAGGCTGATAGAAAATTTACCGTTATGAGATTATGTCTAGCGGGAGCCTCGTATATTGGACTTACGTATATAAATATTTTGTGTGCTTATGAGAGA ATCCTTGATATTGCTTGTTCCATGTTAAGGCAAGGACAATGATATGATATCATGCCATATAATATATGGAACAATAGATGATTGATGATAGATTAGAAAG AATAGTTTTTATTGCAACAAGTATGGGATAATAGATGATAGATTATAGAGAATAGTTTTTATTGCAACAAGTATGGGATAATAGATGATAGATTATAGAG AATAGTTTTTATTGCAACAAG
• Tissue: pods
• Gene name: LI_gene_158900;
• Additional information: details;

Expression of Ll_transcript_508047

FPKM

• PAB: 1.5
• PNAB: 1.8
• PS1: 2
• PS2: 1.8
• PS3: 3.9
• PW1: 4.7
• PW2: 4.2
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508047

• Blastp: GATA transcription factor 11 from Arabidopsis with 38.41% of identity
• Blastx: GATA transcription factor 11 from Arabidopsis with 37.99% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT1G08010)
• CantataDB: Link to cantataDB annotations (CNT0002691)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436280.1)
• Pfam: GATA zinc finger (PF00320.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;