Ll_transcript_508050

• Id Trinity: TRINITY_DN48191_c0_g4_i3
• Name Transcript: Ll_transcript_508050
• Sequence: TTTGGAGCTTGGGGTTGACATAGGATCATCAAGTGTTGCAAGAGGTGTTGTGAGTCTTGTCCTTGGGTATCTCAGCCATCTGGTTATTGAGATGGCATTT TTAGTTCAGGGAAACACACGTGAAGAGCTTCCTGAGTTTCTTCTTGGAACCTGTCGCCTTAACCATTTGGATGCTTCCAAATCAGTTTTGCTGAAGCCAT GATTTTCAATCAGACTTGTCACAACTGTTTATTATGTGCTGTGGGCATTGTTAGGATGGATGATGGTATGTTCACACTACTCTTTGTAAAAATGAAAACT TTATTTCTTCATTAGAAACCACTTATGGGTCTTTTCAAGCTCCATCACATTATAAGTGAATTTCTTAATATAATAAATAGAAGTGTTACTCACCATACAA AAGAATTAAAAAATTACATTATTAAACTATGTATTAGGATGAAGGATGAGAATCTCTCCAAAATAAAATACTAACATATTAAAATATGCTTATAAAAAAA TTTATACCATTTTTTAGTATAATATGGGTATCTCAGAAAATCTAATAGAAAATCAACATTCTCTTTATTCTCTGTCCCTCAAAGCAGTATTAACCTCAAA CAAACTTGTCACCCAAATCTTTATTTTTAGATTTACTATCTTCGTTAATGTCAGTGATAACTCAACGAATTAAGTCTCTCTTACAGGAAAAATAATATAT GTTGTAATAGTATATGAGTTTTATATATTGTAGTATATTATTTATTACTCATATTTAATTATCAGCAATTCTTTAAAAAAAAGTAATCTAAGTAAATGAT ATAGTGACTATGTATAATTTTGACGTTTACCGAATATAAATATTACTCTCTTTAAATAATTAAATAATATAAATATCTCATTGCTCAATCACCAAATAAC CATTATACTTATACCATTGACCAACTATTTTTCTTATTTTCTTTGTTCTTTCTCCTTTCTTTCCCCAGTTTTATTGGCTTGTTAATGTTTACTATTATTT ATGCCTCGTGGTGGTGATATGAGAAAAAAAAAGTTGAGAATGGTTTCATATCACAATTTATATTTTTTGAAAAGCAAAGAATTTTATTCAAGAGAAGTAT CAGAAGTACTACGGTCTCAATACAGTATATAATCACAAATTATGGTCATATCATCATAATTTATTTCGAATATAACATAAATTAAAGAAAACTCTTGTCA AAGTATAACATCATAAGTGAGTCAAAATTTGACATACAAATGCTGAAATTTTATAAATCATAAAAGTAATTATCAGATCAACTCTCCTAAATATTATGAT ACACTGTTTAAAACTTTAAATCAATTTGCAACCTTAATATTATGACAAATTATAAGAGTTAAGTTTTGTCATATTATGAAAAATAAAATATAAAATAATT ACTTACTACTTTGGTGAAAGGTTAGAATTAACTGACCAAGAGTTAAATTACTATATTATAAGACATATATCACATTCTCATGTCTTTTGGAGAATGCATG GGTTATTTCATTTTTCATATGTAACACATGGGATTCACAAAATCTCACTGCTCAACTAGGAAAGTAGTTAATAGTTATCCAACTTATAACAGAAACAACT CTAACTTACTTTATCTGTCTGAAACTGATTTATTGTAACATTTTTTGCAATAAAATTTATCATTTATTTATTTAACTCCTGATCCAGGATACCCAGAAGA GTGAAAGGAAAAAAGGAATCTCATTTTTGCTTTGATCCTTGTACTTTGTCTTTATGTTTTGTCACTTCAATCCTCACACTTTATCTCTCTCTGTTTACAC TGTAATGTGTTTGTGTTTTATTCCTTCACTTAAACAAACTCATCATGTCTAAGGTACCTTCCTTCAATCACTTTCACCTTTTTTTAATGTATTTTTCTCT GTTTTAGCATTAGATGTTGCATGATTTTTCCTTTATGATATCTGGGTATCTTTATTATAAAATGGGTTTTGGAAGAAATTGTTAAAGTTTGAGGCTTTTT AGTTGGATAGTGCTCTTATACAAATTTTCACTATGCTCAATCCCATTGTTACTCATGTTGATATGGACTTTACTTACTTGATCTGGGTGTTTTTTATTTT TATTTTCCAAAATGGAGAAATATGTGAAAAAAATGAGGTTTTTTTAGATGAAATTTACTTGAACTGCTTTTTGCTTTTTGTGTAAAAATACAATGTGCAT GATCTCATTGTTATATATGATGATCCAAATTGAGCCAAAAATATAATTTCTCCTTAAATATTTGTCATGTTTATAGCATGAATGTATGTTTTGATTTTAT TTTATTTTACTCACTGTAATATTTTGAATCAGGGTGTTGCTGATATGAAGGACTTTGGGTTTTTCGGCAAGAATTTTAATGGTCTCCCTGATGAGGTTTT TAATGATATCGTCAACTTTTTCGATTTCCCTTTGGAAGATGTAGAAATTAATGTGGATGAAGACTGGGATGCTCAGTTTAAACGGCTCGAAGAGCCATGT TTTGATGTTTTTCCTGTTGCATCATCTGGGATGTGTGGCAGAACTGAGAATAATCCACAGCTTGGGATAAGTTTCTCAACTTCTTATAATGGCGTGTCTC AAATAAAGCAGCAGCTTGCACAAACTGCTGGACCTACATATGGAAAAACCATTTCCGACCCGAACGACTCCATCGGAAAACATTTGCATCGATTCCAAAC CACTAGTCCAGTTTCAGTTTTTGATAGTAGTAACAGTTCTTCCTCAGCTGAGAATTCCAATGTTGAACAACCTACCATTTGTGTCAAGCGCTCTCGAAGT AAACGCCAGCGTCCTTCAAGCTCCAGTTCTGTTTTCGCAATTTCTTTCATCCCTACTTCACATGCTTTGCAAGAATATCCAGAGACTGATACAAGTCTTA TGAAGTTGAGAAACAAAGTTGAGAAACAAAATGAAAAGGATCTCTTCCTTGTATCAGATCAAGTTAAGATGAAGAGATACTCATCAAAGGACTCAGTTGT CACTAGGAAATGTATGCATTGTGAAGCGAAGAAGACGCCACAATGGCGCGAGGGACCTATGGGTCCAAAGACATTATGCAATGCGTGTGGAGTTCGATAC AGGTCTGGCCGCCTCTATCCTGAATATCGGCCTGCAGTTAGCCCCACCTTCGTGCCATCATTGCATTCAAACAATCACAAGAAGGTCGTAGAGATGAGAA GCAAAGCTATGCAAGAGGCCGTTAGGGGATCGATGTTGTCGTCGTCAAGCTTTTCTAGAAATTCTGTTATAAATGTTTAAATATATGAAAAGATTTTGTT AATCGAGTTTAAGTTAAGGTAAGCCTTACACCCCTGCTTTGTAATTGGATGTAGTCTCTCCGTATATGGTCTAAGGCTGATAGAAAATTTACCGTTATGA GATTATGTCTAGCGGGAGCCTCGTATATTGGACTTACGTATATAAATATTTTGTGTGCTTATGAGAGAATCCTTGATATTGCTTGTTCCATGTTAAGGCA AGGACAATGATATGATATCATGCCATATAATATATGGAACAATAGATGATTGATGATAGATTAGAAAGAATAGTTTTTATTGCAACAAGTATGGGATAAT AGATGATAGATTATAGAGAATAGTTTTTATTGCAACAAGTATGGGATAATAGATGATAGATTATAGAGAATAGTTTTTATTGCAACAAG
• Tissue: pods
• Gene name: LI_gene_158900;
• Additional information: details;

Expression of Ll_transcript_508050

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.9
• PS2: 0.3
• PS3: 1
• PW1: 2
• PW2: 0.6
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508050

• Blastp: GATA transcription factor 11 from Arabidopsis with 38.41% of identity
• Blastx: GATA transcription factor 11 from Arabidopsis with 37.99% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT1G08010)
• CantataDB: Link to cantataDB annotations (CNT0002691)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436280.1)
• Pfam: GATA zinc finger (PF00320.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;