Ll_transcript_509436

• Id Trinity: TRINITY_DN48197_c4_g2_i4
• Name Transcript: Ll_transcript_509436
• Sequence: TTTCGGTTTAAGGTCATCGGGTCTTATTTCTTACTCCTACGCAGTACCTTTACACGATCATGCCCCCTTCATTACTCCACTCTCTTCTTCTCTACTGACC CATTTTCATAACCAAATCAAAGGATCTCACACATTTTCAACCGAATCCAAATGGCTGATACGGTTCTTGATATTCAGGATTCGGGTTGGGATGAATTGCG TAAAGAAGCAAGGAAGATCGAGGGTGACATTGATGTTAAACTCTCTTCCTATGCAAAACTCGGCACTCGATTCACCCAACGAGGTTACGTGGATAGTGGG TCACCACCTCTTGCGTCTAGTAGGTCATGGAAGTCGATGGAAATGGAAATCCAATCATTGCTTGAGAAATTACTGGACATAAATGATTCAATGAGTAGAT GTGCTGCATCTGCTGCACCAGCTACTTCTGTTAATCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATCAAGGG GAACATGAACTCAATGAGGGAGCACGCAGAGCTTTTGACTTCAGTCAGGGATGACATTAGTGAATATAAGACATCTGGTACTACGTCACCAAGGATGCAG TTACTACGCGAGAGAGCAAACATCCACGGAAGTATATCTCATATTGATGATGTGATTAGTCAGGCTCAGGCAACAAGAGCTGTGTTGGGTTCTCAGAGGG CATTGTTTGGTGATGTTCAAGGAAAAGTGAAGGTTCTCAGTGACAAGTTCCCCATTATTCGTAGCCTTCTTGGTACGTTCTAAAGTAGTATTTATCTTTG TATTTTGCCTCTTATTAGTCATATAACTTCTATAAGGTGAGAGGTGTATTTAGAGGATAAATTGTAGATTTGTAGGTAAGTACCCTTAATGTAAAAATCA AAGTGAATTCAAGAATGGTCATCATCTATTATCCAGGTGCATGTATTTTATAAAATTTGAGGGTGAACCTCGGCATAATGGTGAGGTTGTTTGCTTTGTG GCCTGAAGGTCATGGATTCAAATCCTCGAAACCGCTTCTTCACTTGTGAGGATAAGATTACGTACATCTTTCCTCCTCACGTCCCACAGGTGGGAGCTTT GTGTAGTGGGCTGCCCTTTTCACGTAATTTATAAAATAAGGAAACATTATTTTCTCCTAAATGACTATTAGTGTTGTGATTTAGTTTAAGGGTTTGTTTG CCAGATAGTTTTTAGATGGGAAGGAAGGAAAATGGAAGGCTTGAGAGTCATCTTATTAGTGTATTTCATGGCTCTAAAGTCTTTCCCTTGTCTACATTGC CCTCTAGTCACCAACTCCCCAACAGACGCCAAAATACATCACTCAGTTTAGAAGATTCAAATTCTGTGTTTCACATCTTTGTCCAATACTTTGCTCTTTC AGGTTCCATAAGAAGGAAAAGATCAAGGGATACCCTTATTCTGTCAGCTGTTATTGCTGCTTGTACCTTGTTTCTAATCATTTATTGGCTCTCAAAGTAG CAAAGTATTTTGCAACAAAGAAATTATAGACAATGGTGATTTTATCAATTGAATTTCTATGCTTCTTTACCTTATATATTTATGTCTATAATGATAGAAG GATTTAGTTTCAATCCATTTGTTTATGACCCTTAATATGCATTTATAAACACAGCACTTAATTTTTTTTATTTTTCTTGAAAATTCTAACCTGCTCTTTA CTATAAAA
• Tissue: pods
• Gene name: LI_gene_158958;
• Additional information: details;

Expression of Ll_transcript_509436

FPKM

• PAB: 0.8
• PNAB: 0.8
• PS1: 0.2
• PS2: 0.2
• PS3: 0
• PW1: 0.4
• PW2: 0.9
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509436

• Blastp: Golgi SNAP receptor complex member 1-2 from Arabidopsis with 75.44% of identity
• Blastx: Golgi SNAP receptor complex member 1-2 from Arabidopsis with 75.44% of identity
• Eggnog: Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (By similarity)(ENOG410YI1X)
• Kegg: Link to kegg annotations (AT2G45200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460704.1)
• Pfam: Snare region anchored in the vesicle membrane C-terminus (PF12352.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;