| Id Trinity | TRINITY_DN48197_c4_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_509439 |
| Sequence | CAAAGGGTCAGGCTAATTTCGAGTCCAACAAGCATCTCAACCACTTTCAACCGTAACAACCGAATCGAATGAGAAAAAAGAGTAATAATAGAAGATGAAG TAGAAGATCCGAATGACGAATCCGGGTCTTCACCTTCAGGAATCGGGTTGGGAGGAATTGCGTAAGGAAGCACGGAAGATTGAACGTGACAGAAGGAGGA CATGATTTTCTTGGGACAGAAGATCATTATCCGTGACATGGAACTCTACTGAATTGAAATCCAATCCTTGCTTGAGAAATTATTAGACATAAATGATCCA ATCTTGTTAATCAAAAGTTGGCTAGGCACAGAGATATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATCAAGGGGAACATGAACTCAATGAGGGAGCA CGCAGAGCTTTTGACTTCAGTCAGGGATGACATTAGTGAATATAAGACATCTGGTACTACGTCACCAAGGATGCAGTTACTACGCGAGAGAGCAAACATC CACGGAAGTATATCTCATATTGATGATGTGATTAGTCAGGCTCAGGCAACAAGAGCTGTGTTGGGTTCTCAGAGGGCATTGTTTGGTGATGTTCAAGGAA AAGTGAAGGTTCTCAGTGACAAGTTCCCCATTATTCGTAGCCTTCTTGGTACGTTCTAAAGTAGTATTTATCTTTGTATTTTGCCTCTTATTAGTCATAT AACTTCTATAAGGTGAGAGGTGTATTTAGAGGATAAATTGTAGATTTGTAGGTAAGTACCCTTAATGTAAAAATCAAAGTGAATTCAAGAATGGTCATCA TCTATTATCCAGGTGCATGTATTTTATAAAATTTGAGGGTGAACCTCGGCATAATGGTGAGGTTGTTTGCTTTGTGGCCTGAAGGTCATGGATTCAAATC CTCGAAACCGCTTCTTCACTTGTGAGGATAAGATTACGTACATCTTTCCTCCTCACGTCCCACAGGTGGGAGCTTTGTGTAGTGGGCTGCCCTTTTCACG TAATTTATAAAATAAGGAAACATTATTTTCTCCTAAATGACTATTAGTGTTGTGATTTAGTTTAAGGGTTTGTTTGCCAGATAGTTTTTAGATGGGAAGG AAGGAAAATGGAAGGCTTGAGAGTCATCTTATTAGTGTATTTCATGGCTCTAAAGTCTTTCCCTTGTCTACATTGCCCTCTAGTCACCAACTCCCCAACA GACGCCAAAATACATCACTCAGTTTAGAAGATTCAAATTCTGTGTTTCACATCTTTGTCCAATACTTTGCTCTTTCAGGTTCCATAAGAAGGAAAAGATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_158958; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509439
| Blastp | - |
|---|---|
| Blastx | Golgi SNAP receptor complex member 1-2 from Arabidopsis with 82.05% of identity |
| Eggnog | Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (By similarity)(ENOG410YI1X) |
| Kegg | Link to kegg annotations (AT2G45200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460704.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |