Ll_transcript_509441

• Id Trinity: TRINITY_DN48197_c4_g2_i8
• Name Transcript: Ll_transcript_509441
• Sequence: TTTCGGTTTAAGGTCATCGGGTCTTATTTCTTACTCCTACGCAGTACCTTTACACGATCATGCCCCCTTCATTACTCCACTCTCTTCTTCTCTACTGACC CATTTTCATAACCAAATCAAAGGATCTCACACATTTTCAACCGAATCCAAATGGCTGATACGGTTCTTGATATTCAGGATTCGGGTTGGGATGAATTGCG TAAAGAAGCAAGGAAGATCGAGGGTGACATTGATGTTAAACTCTCTTCCTATGCAAAACTCGGCACTCGATTCACCCAACGAGGTTACGTGGATAGTGGG TCACCACCTCTTGCGTCTAGTAGGTCATGGAAGTCGATGGAAATGGAAATCCAATCATTGCTTGAGAAATTACTGGACATAAATGATTCAATGAGTAGAT GTGCTGCATCTGCTGCACCAGCTACTTCTGTTAATCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGTATGTTGTATCTCACTTCT ATTTCATGTTACATTGTTTCAATCACAAAATAAGAATGAATCTCTGACATTGTCTACATTGAAAACAATATCTCTGTAAACTATTACAGTAGTAAATATA GTTTTTTTCCTCGACATTGATTTTGTTTTCTTTGTTTAGTAGACGATGGATGTATGGGCAGATTTTAATAAATTCTTAATTTTCAATCTTCTTATATGCG ATGGAACTTAATTACATGGTGCTGAGTACGGGTACGTGGTTCATTTGGGTACGCGGTTTATTACTTTTTACATTAAACTTATGAAACTTTCTTCGTTGTG AACACAACTATACCATTAATTTATGAAACAATGAATTCGGTACGCAGTACATATCATAAATAAGGTAATTATTCAATGGAATATAAACCTTGGGAGAACT ATACCACACAAGCAAGCCATTCTTGTGGGATGATATATCTTCAATTAGGCAATTTCGCACAACAGTAAAATAATTCTGTCCACCGAAGTATGTTTCCTAC AGAGTATTCTCTGTCCCTGAACTCACAAATAACAACACATGTCACACCACCGCAGCCTATATGCCCAATAGGCATACATAATTGCCCATAACTGCAAACA TAGCAGTTATTACAATACCTATTACTAGTTTCAAACACTACTACGGTTGGTGAGACCTTTTTGGTGTGAAATAAAAAAACTCACAAGTACCACATTGGAG GAATTTTGAAAAAACTCACAAGTCCCACATAGGAGGGAGGAGGAACTTGGAAAAAACTCGGGCTATAAATAGAGGCCTCCTCCCTTCATTTTTTCTTGTC CCAAGTTGAGTGCATTCCTTGACTTCTTTCTCCCTCCTTTTTATCTGCCGAAGCATTTTCAACGAACTTCTTTCTCTTTCTTTCCGTGGTACTAGAATTG CCATAAGCAGCCAAATTGTGGGAATTTTGAAAACTGACACTAGTAGTTAGATTGTGTGAAATTAGAATTGGCACGAATTGCTATATTGTGGACATTTTGA AAATTTTCACTGGTAACCATATTATGGATGTATTTGAGATCGGTTCTTACAATGTAGTAAGAATTCGAAAATTAAGAATTGGACTGTTTTATCCTAGGGA CAATGTGGTTGATAGCCTATTTGCACATTTTGGGCAATGCCGCGAAACGTTTTAAAGAGAGTAACTTGGTCGTGACTCAACCAATAATTATTCTTTCGTG CCATTTAAATTTGTTGCAAGCTATATAACCAATAACTACAACATACTTTCCTAATAGTTTTTGAAGGAGAAATTCATCCCCCCAAGTTGTATCTTTCTCC AGCTGACATTCCTCTTCCTTGGACCAAAAACTGTTTGCTGTTTCACCTTATTTCTTCAAATTTTCTGGTACCCAAAATTGTTTGTGGCTGCATCACATCA CTGCGTTGAAGCTCTGAACCAGCAGGCAATTCTGGTTCATGCCGTTCTATTTTCACCATTTGTTCACCATAGTTGAAAGCCATAGACATTTTTTCGAATC CATAAGTACGTTGCCCAATATGAGTACGGGATATGACATATTGTTAGAAAAATAGATTATGGGTATGTTAATATATATATATATATAAGTTAATATATAT GCAAATTAAAATTAATATTTCATGATAAAATATAAATTTTTTTACAGTAAAAGCTTAAAAAATTAGAGAAAATTAATAATTGGAAGTGAGATATTTTGTT TAGATTCTTTAAAGTTAGTTAATAAATAATTTGACATTAGCTTCTTGCATGATAAATACATGTAAAAATTTACAAGGCAAATAAGTGGGACAGCTATTAT ATTTTCCTGTGATAGAGCTGATTACAATGTAACCAATAAGCTCAATGAGGATACAGTGAGCAGGTGTTAATTCTAATGAGAACATTGACGTAATGAATTG AAGATTTCTATCTAAATTTCTTTTGCTCTAACAAGTTTATTTTAACATCGTTGTCTTTTGAATTTCATACTTTTAAGGAATTTAGGCGTATCAAGGGG
• Tissue: pods
• Gene name: LI_gene_158958;
• Additional information: details;

Expression of Ll_transcript_509441

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509441

• Blastp: Golgi SNAP receptor complex member 1-2 from Arabidopsis with 71.09% of identity
• Blastx: Golgi SNAP receptor complex member 1-2 from Arabidopsis with 71.09% of identity
• Eggnog: Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (By similarity)(ENOG410YI1X)
• Kegg: Link to kegg annotations (AT2G45200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460702.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;