| Id Trinity | TRINITY_DN48206_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_301888 |
| Sequence | TTTCGGCGATGGTTTAAATACCTGTTGGGCTACTCCTCTCATTGTTAATTGGTTTTGAGATAGAACCTTAACAGTAGGAATTTCTAATTTTGTAATTTTC ATGCTTTATGTCCTCAAATTCATCCATATTTATTGTACTTTTCTGTATATTTTGTTCTTCAAATGACAAATAGATTTTCCTATGTGGTTGAGGATTTGAT TAAGTTGAGGATATCAAAATTAAGTTACATATACTAACTTGGATAATTTGATTAAGATCCCTTGGAAAAGCACATAGGAAACTTAATCTTGGTTAATGGG AGTTCAAATTTCTTTAGTATTGTTCTTGTTGGGAGTGTTGAGTTAGGGAGACACTCCTCTGAAATACAATTTTCATTTTCGAGTTTAATGTGTGTAAATT TAAAGAGCGTAAATTTGTTAATCCGTAAATTCATTAACCGGGTATGATGATTGTAACCATTCATCATTTTCAATAGTTTACATTGAGCAATTTAAGCAAA ATGTACTTTCCATGAGGCACCCCAATTTAATTAAAATTGATCTTTAGGATATGTTTTGGATTTGATTACTAGTGATGTTATAGGTAAAATTCTTTTCTTT TTCAATTCTCACTTTCAAAATGTCAAACAATGCAGAATCTATCTTTTGCAGTGTATAATTAATTGTAGGTCAAAACTGAGGCCAACCTGCAGAATGAACA TTTATCTATCTCCAACCACCTAGTCCTACCAACTTTATGAGATGTATTCAAATCAATATATCCAAATTAATATGGTTGATGTGGTGGAATGTTAGGATTC AATTGCTAAGTATGGGACTCGTCACGTATATTCCATTGCTGGAGGGTCCAGTACAACAGACGATCTCGATTCAACTTAGAGAATATTTTTTCTATTTATA TAATTTTTTTGGGTCTGTCATGGCTAGCTTTTGTAGGGTGGTTTTCCGAATGTTCGTATCAATTGGTATTAGAGCTTTTCGCCGTATCTATGAGGTGCAA ATAAGCTGTGTAGATGCTAACATCAGAATTGCAGTATTCACCTATGAACTAGCCAAAGGGCTAGTGCACAACCAACCCATGTTAGGATCCAATTGCAATG TATGGGACTTGAGTTTCACATCCAAAGTATGAGACTCTTGTGTGGGATTTATATGGCTTTAGGCTTTTTACCACAATGTGTGATTTATTTGTGTAAGGTT GGTTTCATTGTGATCTACAGTGATTGCAACCAGAACATTTAGCTATAACGCATTGAGATCAGCAACCGGAGATTTTCATCCTTCAAGCAAAATTGGTGGA GGAGGTTATGGAGTTGTCTACAAGGGATCTTTAAGGGATGGTACTCAAGTTGCTATTAAGTCTCTTTCTGTGGACTCTAAACAAGGAAGCCATGAATTCA TGACAGAAATTAATATGATATCAAATATACATCATCCGAATCTGGTAGAGCTAATTGGCTGTTGCGTTGAGGGTAGTCACCGAATATTGGTCTACGAGTT TCTGGAGAACAATAGCCTTGCCAATTCCTTGCTTGGTTCCCGGAGTAAATATATTCCTCTGGATTGGCCTAAGAGAGCTGCTATATGCCATGGCACAGCT TCCGGCCTTAGGTTTCTTCATGAAGAGGCTCAACCAAACATTGTTCACAGAGATATCAAGGCCAGTAACATACTTCTGGACCGGAACTTTAATCCTAAAA TTGGGGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGCGTTGCAGGCACGGTGTAAGCACATATGCGCAACTTATATTA ATGTTTTGGAAGTTAGTTTAGTCTTCAAAAAATTTGTGAACTTATTCTACTTCCATAGTCCATCTTAAGACAGATTTTGATAGGAAGAAAAAATATCAGT AGCACATATATTCCATAGGTTCTTATGAATCCTTATGAGTTATGACTATGCACTTTTGTTCTTCTAGTTCTAACATCATGAAATCACTTTCAGACTTTAG TATTGTCTAATATAGTATAATATGCTCCAAAATTCACATCAATGTAATAGTTCACTCATCTTAACATGCACTGCTGCTATCTCTATTTTCATTATTGAAA TATTTAATCATTACATTTTAATTTTGAAACATTAAGAAACAATGTCAAGTAATTTATTTGACAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_159054; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_301888
| Blastp | Cold-responsive protein kinase 1 from Arabidopsis with 66.93% of identity |
|---|---|
| Blastx | Cold-responsive protein kinase 1 from Arabidopsis with 62.3% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT1G16670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462412.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |