Ll_transcript_301875

• Id Trinity: TRINITY_DN48206_c3_g1_i2
• Name Transcript: Ll_transcript_301875
• Sequence: GTTGTCTTCAAGAGTGGTTATTACGAAAACAGGACCATATCCTATATTCAATTATGCATTTTGACAAGTTAACTATAAATATTAAAGACAAAACTTTATG TCACTTTCATAGTTTACCTTCCAATGTTCTTGGTCTTCATTTTCCTTAATTGCTTACTTGACCCTTTATTTCATTTTCCACTTCTATGCCATATATGGAT TATTCACACCCTCTTTCCATTTCTTCAACACTGTTAAATCTTATATATTATCCTTATTTCACTCACCTTTCTCTTTATGCAAGTAAAAAACACAGCTTTT CAACTTTTCCACACACCCATAATCAATTTGAAGACTCAGGGTTGGGTTATTTTTTGATGGGTGATTCATGCCATGCTTAATTGTTGGTACAAAAACTGCT ACAACAAGGTTTAATAGTTGCATAGAGGATTGGATCCGGAGTCATAGCCATGATTTGTAATTGCTTTGGTGCCTTCAATTGTTGTGAAGGGAAAGATGGT GTTGATGATCAGCCACAAGAACAAGTGATTGCAACCAGAACATTTAGCTATAACGCATTGAGATCAGCAACCGGAGATTTTCATCCTTCAAGCAAAATTG GTGGAGGAGGTTATGGAGTTGTCTACAAGGGATCTTTAAGGGATGGTACTCAAGTTGCTATTAAGTCTCTTTCTGTGGACTCTAAACAAGGAAGCCATGA ATTCATGACAGAAATTAATATGATATCAAATATACATCATCCGAATCTGGTAGAGCTAATTGGCTGTTGCGTTGAGGGTAGTCACCGAATATTGGTCTAC GAGTTTCTGGAGAACAATAGCCTTGCCAATTCCTTGCTTGGTTCCCGGAGTAAATATATTCCTCTGGATTGGCCTAAGAGAGCTGCTATATGCCATGGCA CAGCTTCCGGCCTTAGGTTTCTTCATGAAGAGGCTCAACCAAACATTGTTCACAGAGATATCAAGGCCAGTAACATACTTCTGGACCGGAACTTTAATCC TAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGCGTTGCAGGCACGGTAGGATATCTTGCACCAGAGTAT GCACTTCTAGGACAGCTTACAAAGAAGGCTGATGTATATAGTTTTGGGGTTCTTATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCAGCATTTG GAGATAATCTCTTGGTTCTTGTAGAATGGGTACATTTTTTGGATTCTTGGGTCACAATAATATTGATTCAATACATGCTATGATCTTATATTAACTTCTT TAATTGCCTTAGACATATACAGATAAATTAAAGTCACAAATTATCAGAAGCAGAATTATATTCTTATCTTGATAATAGGAGACCAGTATCATTGTAAAGT TGAAATTTTTTAAGGCTTCTAATGAATAATATCATGTATTTTCACTCTGATTCTTAACACTTATATTGTATTGAAAACTCATCCATGATTTTGTTTCACT CTGATTCTTAACACTTACAAGTTATACCAAACTAACCATGAATACAAACAAGGCGTTGGTCTAGTGGTTTAAAGCCCTGCTTCGGTTCCTGGAGCGAAAC TTGTTGGAATGAGCAGTCACGCACCCCGAAAGGAATTAGTTCCTTACCCATACGGCATGGAAGCTGAAAGAAGAAGAAAGGCTTCTGGACATCGTAGACC CGGAACTAACCGATTACAACGAGATCGAAGTGTATAGGTTCATCATGGTTGCTCTATTTTGCACCCAAGCAGCTTCTCAGCACAGACCAAGCATGAAGCA AGTATTGCAAATGCTTTCCAAAGAAGTTCATATGAATGAGAAAGCATTGACTGAGCCTGGAATATATAGATGGCATTCCTCTGCAAAGATGAACACTTCT TTGAATGAATCTTCATCATCTTCTTCTTCTCAAGTAGTGAAGCACAACAAATATGAAAATCCATATGTAACTTCAAACAACTTGAGTGGTACAGATATTG TGACAGAGATGATTCCTAGATGATTGTTTGTTACATATGATGTTTGGTTCATATTAGTAGGATGTTGGATAGGCTATATCTTAAGATACACTCCTATCTT TTCTTTATCTTGTTTCAGAGGCCGAGTCTCGGTGCAACTATAAGGTTGTTGCCTCCTTATGACATATAGGTCATGTGTACATGTGACGTAGAAGCAATAT CTTCATTTACGGAAAAAAGGTTGTGTATATTTATCCTTTATATATCCTTCTTCCACCATGCAAAAGCCTCGTATAGTTAGAGGCGGAGGTTGGAAGGGAC AGGTGGGGGCAGCTGCCTCCGTGATTTTTTTTTAATTTATATATATATATATTTTTTATCCTTTGAGAACACGTCTGTTATCTTATAAAGTGTGTGTCAC TTCATATGCAATATATTTTATTTGGCTATAAAA
• Tissue: pods
• Gene name: LI_gene_159054;
• Additional information: details;

Expression of Ll_transcript_301875

FPKM

• PAB: 0.1
• PNAB: 1.8
• PS1: 1
• PS2: 1.2
• PS3: 1.6
• PW1: 3.4
• PW2: 4.1
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_301875

• Blastp: Cold-responsive protein kinase 1 from Arabidopsis with 61.21% of identity
• Blastx: Cold-responsive protein kinase 1 from Arabidopsis with 61.21% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G16670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462410.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;