Ll_transcript_303653

• Id Trinity: TRINITY_DN48222_c0_g1_i1
• Name Transcript: Ll_transcript_303653
• Sequence: CAGTGTATGAGCTTTATACACTGTCATTGCATCATTCACCCTTAATCTTTTGTTTTTTATTGACGTTCCAAAAAATATAATCTAAATAGACAGTGAATGA TGAGGTGAATATGTATAGATCTTTACACAGTCACTATATAGATTTTATACTCTTTTTTATATTACTTATAATCATGATCATTAGAAATTAAATCATGAAC AATGAACTTAGTGTACAAAAGTATAAAACTCTTACATGGTTGGTGAGATTTTCTTATGTAATAAATAGGGATTGATGATTATAATAATATGAATGGAATG AATGGGCATCATCACCCACCACGCCCATTCTTCGTTTTCTTATTTCAACCACCACGTTTACCGTTACAGTTCCCTTCTTTTCACATCACGCTTTTACAAA ATGCTAGCTTCCCCGTTTTGCCTCCGTTCCGTCACCGCCATGGGTTCCGTCACCGATCACACAAATGCCACCGCTTCTCACTCCCTCTCATTCCATTTCT CGCCATCACCGTTGTGTCTTCGTTTTCGATGCCCTAAATCGATCCTCATTTCTTGTAATTCTTATCGTGGACCCTCCCGCATCAGATCCAGCTTCGATGA TCATCACAACAATAATCACTTTCTTCCAGCCTCCCTCCTCCTCTCAGAAACAATCTCACATTATCATATGTGGAGCCATCGATTTCGAGACGACTTACTA TGGAAATCCTCGGAACCATCAACTCCGTTATCATTCCAGGGGAAAAACACGAGAACATATAATGATAATAGTTTAATGAGACAAGGATTTCTACAGCGTT TCCAGGATCCCACAATTTTTCTCAAGATTTCTTGTGATGGAGATTATATTCTGCCCATTGCTGTAGGGAAGATTGCCATTGAAAAACTTATAGATGCTGA AGCTGAACAAGAAAATGGGGATTGCCCAGACCAGTTCAAGTTCGTGAAAAACCTTGTTGAAAGACTAGACCATGAAGTGATAATGGTGAGAATAACAGAG AGAGTGGTCAGCACTTACTTTGCAAGATTGTACCTTAGCCAGCCAGGGAAAAGTGATATTATTAGTGTGGATGTGCGCCCTTCAGATGCCATCAATATTG CAAATAGATGCAAGGCTCCAATATATGTAAGTAAACATATTGTTTTAACAGATGCTATTAGACTAGGCTATGGAATGGGGAGAGCGCGAAACAAAAAGCC TATTTATGACGTATTGCTCGACAGTCCTGGAGATGGTCCAGATTCGGTCGCGCAAGAGCTAAGTATGATGCATAATATGCATACAGCTATCAGACAGGAA AGATTTAAAGATGCAGCTTCATGGAGAGACAAACTTGCATATCTTCGAAAATCATCGCAGGACCACTAATAAGCTTGGACAAGTTCTGAAGAAAACTAGC AGAATTATGTGCTGTTCACTTGTGCATTAGAATCGTCAACGGATAGTGTACATATAATGTATTAAAATCTCCTAAGCCTAGAAGACTACTCTGCTTCCTG CTACTACTAATACTAATCATGGTCGAGTATGTGTGTAACCCTTGACAGCATCGTCATCATCATCAATAGAAGAATTAATGTATGGCCTTGGCACTTTGTA ATGAATATAACAATCTTCTGAGTTCTTATTTTAAATTAATATACGGTCCTCTTTCTTATTTTATATGTTAATGCATTGAAGAATTTAAAGCCTTTGGTAG CAGACGGAATAAACGTGAGATTTGCCTTTTCTCTACATAACCTCAA
• Tissue: pods
• Gene name: LI_gene_159172;
• Additional information: details;

Expression of Ll_transcript_303653

FPKM

• PAB: 2.1
• PNAB: 5.3
• PS1: 10.3
• PS2: 9.8
• PS3: 13.8
• PW1: 5.7
• PW2: 6.8
• PW3: 7.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_303653

• Blastp: Bifunctional nuclease 2 from Arabidopsis with 39.78% of identity
• Blastx: Bifunctional nuclease 2 from Arabidopsis with 39.78% of identity
• Eggnog: Bifunctional nuclease with both RNase and DNase activites. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen(ENOG4110AP6)
• Kegg: Link to kegg annotations (AT1G19660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444861.1)
• Pfam: Bifunctional nuclease (PF02577.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;