| Id Trinity | TRINITY_DN48222_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_303668 |
| Sequence | CAGTGTATGAGCTTTATACACTGTCATTGCATCATTCACCCTTAATCTTTTGTTTTTTATTGACGTTCCAAAAAATATAATCTAAATAGACAGTGAATGA TGAGGTGAATATGTATAGATCTTTACACAGTCACTATATAGATTTTATACTCTTTTTTATATTACTTATAATCATGATCATTAGAAATTAAATCATGAAC AATGAACTTAGTGTACAAAAGTATAAAACTCTTACATGGTTGGTGAGATTTTCTTATGTAATAAATAGGGATTGATGATTATAATAATATGAATGGAATG AATGGGCATCATCACCCACCACGCCCATTCTTCGTTTTCTTATTTCAACCACCACGTTTACCGTTACAGTTCCCTTCTTTTCACATCACGCTTTTACAAA ATGCTAGCTTCCCCGTTTTGCCTCCGTTCCGTCACCGCCATGGGTTCCGTCACCGATCACACAAATGCCACCGCTTCTCACTCCCTCTCATTCCATTTCT CGCCATCACCGTTGTGTCTTCGTTTTCGATGCCCTAAATCGATCCTCATTTCTTGTAATTCTTATCGTGGACCCTCCCGCATCAGATCCAGCTTCGATGA TCATCACAACAATAATCACTTTCTTCCAGCCTCCCTCCTCCTCTCAGAAACAATCTCACATTATCATATGTGGAGCCATCGATTTCGAGACGACTTACTA TGGAAATCCTCGGAACCATCAACTCCGTTATCATTCCAGGGGAAAAACACGAGAACATATAATGATAATAGTTTAATGAGACAAGGATTTCTACAGCGTT TCCAGGATCCCACAATTTTTCTCAAGATTTCTTGTGATGGAGATTATATTCTGCCCATTGCTGTAGGGAAGATTGCCATTGAAAAACTTATAGATGCTGA AGCTGAACAAGAAAATGGGGATTGCCCAGACCAGTTCAAGTTCGTGAAAAACCTTGTTGAAAGACTAGACCATGAAGTGATAATGGTGAGAATAACAGAG AGAGTGGTCAGCACTTACTTTGCAAGATTGTACCTTAGCCAGCCAGGGAAAAGTGATATTATTAGTGTGGATGTGCGCCCTTCAGATGCCATCAATATTG CAAATAGATGCAAGGCTCCAATATATGTAAGTAAACATATTGTTTTAACAGATGCTATTAGACTAGGCTATGGAATGGGGAGAGCGCGAAACAAAAAGCC TATTTATGACGTATTGCTCGACAGTCCTGGAGATGGTCCAGATTCGGTCGCGCAAGAGCTAAGTATGATGCATAATATGCATACAGCTATCAGACAGGAA AGATTTAAAGATGCAGGTAAAATATCTTTGGGTATGATTGTATCAAATATTTAATCTGTGATACATTCATGACTGTTATAGTCACTACATTGTTGCCCTT TGAAAGTTGGAATATCTTAAGCGAGAATGGTAATGTTATAGAATCTTATAAAATTATCTGCATTTTGCAGCTTCATGGAGAGACAAACTTGCATATCTTC GAAAATCATCGCAGGACCACTAATAAGCTTGGTGGGTATGTCCAAAAATTGCTTTTGGCCACTTGAACCTTTAGAAGTTGACATTTAAAAAATAAAAAAC AAAAGAGAATCATTTGTTTATTATAGTTTTGCTGTTTAGCTCTCTGAATAAATATTGAAAATTTTCATGTGGTGATGACAGGACAAGTTCTGAAGAAAAC TAGCAGAATTATGTGCTGTTCACTTGTGCATTAGAATCGTCAACGGATAGTGTACATATAATGTATTAAAATCTCCTAAGCCTAGAAGACTACTCTGCTT CCTGCTACTACTAATACTAATCATGGTCGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_159172; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303668
| Blastp | Bifunctional nuclease 2 from Arabidopsis with 37.71% of identity |
|---|---|
| Blastx | Bifunctional nuclease 2 from Arabidopsis with 37.71% of identity |
| Eggnog | Bifunctional nuclease with both RNase and DNase activites. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen(ENOG4110AP6) |
| Kegg | Link to kegg annotations (AT1G19660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444861.1) |
| Pfam | Bifunctional nuclease (PF02577.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |