| Id Trinity | TRINITY_DN48227_c0_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_302368 |
| Sequence | AATGGATTCTCCTTACTTCTCTCTCTTCTTCATCTTTTTTCTTATCTGTTGAATGTTCTGGTGAAACCTTGTATTCTTCTTCAGCTCCTAATTTTCCTCT TGTTTTTGTTGTTGTTAGTTAAACCAAGTAACTGAACTCTGTTTTCCAACTTGTGTGTTAATCTTTTATTTTTAAAAAGATACAAACTTTCAATCCTTAT ATTTGGAGGGTACTGATTAGTTTTTGTTATTTTTCTTAGTCTTTCAACTTTTTTCAGCTTTAGCATTTTTCTTAAATTTGTTTTTACAATTTACTGTTTG TTTTTACTTTCAAGCCACTCCACTTCAAAAATTTCACTTGCCCTCTGTATTCTCTCTGTATTTTTTTTATCCCTACTTGATGTACTATGGTTTATTCCCT TTCAGTTATTTTTAGGAACTTTGTCTCTTAACTTTTCCACCGAAAAGTAATTATTACTTAATATAATGTATTCATACTCTGTGCAATGAATTATGAATGA TTAATGTCTTGTCTCTTATGTTATATCATTGATTCTAACTCTCAAACCCTTGTTCCTCACATTGTTTTGTCACAATTTAAAAATCTATACTTGTTGCCCA TTGTTGCTAATTTCATGCATCTTTCTTTTCTTTTCTTTCCTTTAGGAACAAAGGGTATACCAAAACTGGGAGCTTTTTTGTTTTGAATTCTGACTCTGAT GTCTTTGCCGAGGCTCGGCGTAGGGGAGGAGGGGGAGAGTAATGTGATTTTGTTGGTTTCATCACCAGCCAAAGAAAGTGTGTGTCTCAAGAGCTTAGAA CTAAAAGAACACAACTACATGGGGTTATCTGATTGTTCTTCTGTGGATAGCTCAGTTCCTTCATTCTCAGATGAGAGTAAAAGTAATCTGAACCTGAAAG CCACAGAACTCAGGCTTGGCCTTCCCGGATCTCAGTCACCCGAAAGAGATTATGATCTTTGCTTAAGAAGCTCAACTCAATTTGATGAAAAGCCTCTTTT TCCTTTGCACCCTTCATCCGATGATCATCATTCCCCAGCAAAAATTGCTGTTTTGGGTAACAAAAGAGGGTTTTCAGATGCCATGAATGGTTTCTCAGAG GGGAAATTTGCTGTTAATTCTGACACTGCTACGATACTTTCACCGAGGCCTTCTCCTAACATGGGATTAAAACCTGGTCCTGTGCTTGAGAGTGTTGCGG CTCATCAAGCCAAATTAAAAGAACTAGCAACAGCGAAGGTGGGACTCGAGAGGCCTCTTGCTCTTAATGAAACCAAACCAAGTCTTAATGGTTCTGCAAA TAATAATAGCAGCACACCGGCTACCAAGGCTCAGGTTGTAGGGTGGCCTCCTATAAGATCATTTCGGAAAAATTCATTGACAACTAATTCCAAGAACACT GAAGAAGTAGATGGTAAACCGGGGTCTGTTGCACTGTTCATCAAAGTCAGCATGGATGGTGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTG CATATCCAGAATTATCTTCTGCTCTAGAGAAAATGTTCAGCTGTTTTACTATAAGTCAATGTGGATCTCATGGAACTCTGGGAAGAGATTTGATGAATGA AACCAAACTGAAGGATCTTCTTCATGGATCAGAGTATGTTCTTACTTATGAGGACAAAGATGGAGACTGGATGCTTGTTGGTGATGTTCCCTGGGAGTAA GTTCTAATTTTTTTACGTACTTGCTTTTTTATCCGCACTTCTTTAAAAAGAATAAATTCCTCGGAGACAGCAAATTTATTTTTAGTGAAGTTTTTTCGTC AACATTTTGTTTTTGGTTCATATTAGCTTGTCCTGAGAAGGAATGTTGATGGATGGTAGAAAAATGGTTTTGCATAAAGAATTGTACAAATCCAAGCAAG GTTTGAATAGTGAGTGTAAAGAATAATGCATATTTAGGCTCATAAGTAGGGATGGCAATGAGCTTCATAGTTGGTGTCTTGTCGGTCACTCCTATCACCA AAGCACTAGGTCTTAAAACTAATTTTTGTGACACCAATCCACGGACCTTGACAGCCATGGTTGAATAGTTGGTGATTGTCTTCTTTATGTTATGAACTGA CTGGCTCAATGAGCTTGAGCTGAGTTTGACCGAGTATCAAAATGAGTTCGTTTTATCCTTGAGCTAGGAAATTTTCAATTGAATAGATCACAACAAAGTG ACTTCGTGGACTTTAGGTTTACCTTTTCATTTCACCTTAAAAGGTCTTACAATTTTCTCCATACTTGATGAATGTGTAAAACAGGCCTAGCGTGCCTGGG AAGTGTGAAATGAACAATAACAATGTATATGTTACCCATAAATTATCTATGCATATTAAATGCAGCCTTCTAGAGAGTATCATTACTATCATAAGAATGG CTTATGACCTGTTTATCAGATAGAATCAGTTTCAAGCCTAAAGAGTACATAGTAATATGATTGATGCATGTGTATGATAACTGAAAACCTTAAGCGTCTT GTATCACGTTCTATGACTCATATCATCTATTCATGTAATTTTATTAACTCGTAATGACTCACTTAATTTTATTTCTAAATACCCGGGACAATTTTCAGTA GTAAATATTTTTCTGGGGGAAGCTACAATGGAGAGCCAATTTTTAGTCACGGTGGTAGAAGAATTATATAGTTGTTAGGAGTTCCGCAATTAGTGACAAT GCATAGATAGTATACTCTACTGAAACAGAAAAAATAATGCGTCGACACTGTCATTGCATCGTTCAACATTCATATCTAATCATCATTGACTCTATCTTGA ATAATGCAAATGAATGATAGATGATTTACTAATTGTGTACAATGAGTGCATAGATATACACTCATACCGAAGCATCAACTTTTGCGATAATCATTTTTAA CTAGTAGACGAGCTAAAGCTATAATCTATTTTTTTGTCAAATATGGAAAAATACGAAATATATTTGTAGGCGTGTATGTCAGCTGAATTTTGATTAATTT AATGTTGATATACTACCAATATACAAATTTTTGTGTGAATGTAGTAGCATGTTTTTCATTTTTCTACAAATTAATTTCAATCCAATGTCTCAACTCTTTG CAGGATGTTTATTGAAACATGCAGGAGGATGAGGATCATGAAGAGTTCTGATGCCATTGGTCTAGGTTAATATTATCTACTTGAATGTTACAATTCCGTA CTGAGTGTTTAGGGTTTAAAGTTAATAATTTCTCCGACAAGAATACAGTTAAGCATTCTGAATGTGGATTAATTGTTTTTGTAAAAAGTGATTATTTTTT CAATTTTGGAAAAATGCTCTATGGATGTGAACTCAGATTGTGGGTTAATGTTGTTTCTAGTTTTTGTATTTCAATATTTTGCACCAAAGTTATCTGTGAA GAAGATAATGAGAGAACCATAGTTAAAGCTATTTCACTTCAATTAATTTTTAACCTGCATTCGACTTCTGTTGATTTATACTTTAAAGCGAAACCAAAGC TATGTTAGGAATTTTGCACAAAATATCCATGACTGTTAAAGAATTTAATCTCAGCTTATCTTATTAATGTTTAATTTTGTGCCAACTTGCAGCTCCGCGA GCTGTTGAAAAGATCAAGTGCAGGAACTAGATAGTAGCACTTTTTACGCTCTATACATTAAAAGTTTTTGGATCATTCCGTGGCGCAAATCAAGGATATG GTGCAGCAGATTAACTTGGAGGAGAGAACTGAAGGCATTTCGAGTGGATCGACTGTCACACTAAGCTGCCTTAAACTCTTCGCCTTATACTATTCCGTCT TATGTTGTCATGTCTTTTATGTTCAGTGAACTTTTTCTCAAGCTTGCTTAAACTTATAAAACTACAAGACCTGACTGTGTGTACTAATATGATATGTAAG TGAGTTCATGAAGTGGCTAAAGGAGCTGTAGCGTGTAAATTTTGCGTCGTTCCGAGTCTTATGTTTGTGCGATAAAAAACGGATTTGTTTGTTTAGTTAT ATGCCAAGTGCCTCATATATATTGTTTTAATATCAGTTACCCTTTGCTGCTTATCAATGTTAGAAGTTCTAACTCATACTTGCGTTGGTTTACCCTTGAA TTCTACTGTTTTGGAATATAGATATAATTGTGCTTGTTGAATCATTGAGGTTTGAGCCTTTACAATAAACTATTAGATATTGTCAAATGTGTTAGATATG GTTGCTGGGGGATCCAGGAACCAAGCATGTGAAGCTCTGACCATAGGCTAAGGCTTGCAACAGTGTATGGATCTTCATGCTCAAATAGGATAATAATGCA TAGCAGCACTATGAGTGATTCTGAGCCTTTATTGGCTCTAGTTTTGTGAAAAGAATTTGAGGTTAATGATAATGTAGGTGAAATGCCTTGCATAAACTGA CAAAGGTTACTGGGTTGTCCAGTATTACTTGTGTTTTGAATGCTTCTACAAGTTGTAATATAAGTTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_159215; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302368
| Blastp | Auxin-responsive protein IAA9 from Arabidopsis with 53.21% of identity |
|---|---|
| Blastx | Auxin-responsive protein IAA9 from Arabidopsis with 52.38% of identity |
| Eggnog | auxin-responsive protein(ENOG4111VTJ) |
| Kegg | Link to kegg annotations (AT5G65670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417388.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |