Ll_transcript_304139

• Id Trinity: TRINITY_DN48233_c3_g1_i10
• Name Transcript: Ll_transcript_304139
• Sequence: GGGATATTCATCATACATTCTTAACTTCCACTCTATTCTCATTCTACTATTTATCATCCCACTATGTAACCCCCTAGCCTAGTATTGGCTACCTGGGCAT TGTTTCCTCTTCTTAGAACCATTTTCTCAGTAACTAATTCTATTAACTCATTGTTTTTTTTAACAGATTCTATGCCGTAATAAAATTCCCCTTATTGGTT TAGTGGAAAAGGTAGAGCAAGAGCTTGCTTGGAAGGCTGAACGGTCAGATATTTCTGCGAAGCCAAACTTGTATAAGTTGCTCTATGCGTTTCAAATGAA TCAGCATAATTGGGGACGAGCGGCAAACTACATGTACCTTTATTCAGCTCGTTTGAGAACTGAAGCCGCTTTGAAAGATCACCAAGGTGGTTCCTTGATG TTGCAAGAGAGGCTTAATGCACTTTCTGCTGCTGTCAATGCACTGCATCTTGTTCATCCTGCATATGCTTGGATTGATCCACCGTCTGAGGGAAGTTCTG CTTTGAGTGAACATTATCCGAGCAAGAAAGCAAGAATAACACCAGATGAACATTCTGATAATGATTTTGAGTCTCAAAGCTGGAAGCCCTCTATCGATAT TGAAAAGCTTGAGAATGAGTTCGTTCTAACTTCAGCAGAGTATATGCTGTCCCTGGTAAATGTCAAGTGGACATTTAATGGAAAACATGGAGCCCTATCG GATTTGGCTGATCTTCTTGTCCAAAACAATTTATATGACATGGCCTTTACAATTGTTCTCAGATTTTTCAAGGGTTCAGGACTGAAGAGGGAACTGGAAA GAGTTCTATCTGCCATGTCATTGACATGCTGTGTTGATAAAGTAGAATCCACTCGGGTTGAGGAACATGGTCATTTCTTGACATCATCAAAGCTTGAGAT GGTTGTCCATGGTTCACCTGTTACAGGTCCTACAACTCCACAAACTGACAGAAATAGCTTTTGGGCAGCTCTCAAGCTTTACCTCGAAAAGTATAAGGAG TATCATGGTAGATTACCAGTTATTGTTGCTGAAACTCTTCTACGCACTGATCCACAAATTGAATTGCCTCTTTGGCTTGTTCAATTGTTCAAGGAGGGTC AAAGGGAAAGGATGTGGGGAATGACTGGCCGGGAGTCAAATCCAGCATCCTTATTTCAGCTTTATGTTAACTATGGTCGATATGCAGAAGCTACTCATCT TTTGCTAGAGAGCATAGAATCATTTGCTTCAACGAGACCAGCAGATATAATTAGAAGGAAAAGACCATTTGCTGTTTGGTTCCCATACACAACAATTGAG CGTCTACTGTACCAACTTGAGGAATTAATCAAATTGGGTCACATGGTAGATCAATGTAACAAGCTCAAAAAGATGTTGCATGGTTCTTTACAAAATCACC TGAAGACGTTAAAGGTGGACTCAGATGATGCAATTTCTGCTTCTTCTTGACTGCATCTTTAAACTGGTTACTAAAGGCTCTTACTGATAGATATACAAGT ATATTCATTCTGCTCTGGTGTTGATCTCTCTGCTGAACAGCATAATATCCAATGTGAAGTGCTAGACACATAATGTTAAAATTGTGGTGGAAGAACCATG CTCAAACTAAATCACCCTCTTACCACAGAAACAACAAAACTAATCGAATTGCGGCCGCCTCATCTTCTCAGGAGTAGGAGGTGTACTAGTCTCCAGGGAA ACTCGTCCGGAAATTGTATGTGCGTTATCTGAAAATTGTATGTGCCTTTGTTTGATCTTCGATGTTATGGCTATATTGGTACAGTACAGTTCAACTGATT GCTGGGAAATTTTGATTATATAATTATTTGTGTATGAATATGCGTCTTATTCCACCTGATTCCTGGGGCTGGCTTAATGCGATGATGTGAAAATCACAAT TTTAACAATTTTAAAGTGATGTGAAAATCAACTCAAAAATATGTAAGTCTCT
• Tissue: pods
• Gene name: LI_gene_159267;
• Additional information: details;

Expression of Ll_transcript_304139

FPKM

• PAB: 0.4
• PNAB: 5
• PS1: 2.2
• PS2: 2.7
• PS3: 3.6
• PW1: 2.1
• PW2: 1.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304139

• Blastp: Nuclear pore complex protein NUP160 from Arabidopsis with 54.95% of identity
• Blastx: Nuclear pore complex protein NUP160 from Arabidopsis with 54.44% of identity
• Eggnog: Nucleoporin 160kDa(ENOG410YYM5)
• Kegg: Link to kegg annotations (AT1G33410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461186.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;