Id Trinity | TRINITY_DN48233_c3_g1_i2 |
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Name Transcript | Ll_transcript_304130 |
Sequence | GGGATATTCATCATACATTCTTAACTTCCACTCTATTCTCATTCTACTATTTATCATCCCACTATGTAACCCCCTAGCCTAGTATTGGCTACCTGGGCAT TGTTTCCTCTTCTTAGAACCATTTTCTCAGTAACTAATTCTATTAACTCATTGTTTTTTTTAACAGATTCTATGCCGTAATAAAATTCCCCTTATTGGTT TAGTGGAAAAGGTAGAGCAAGAGCTTGCTTGGAAGGCTGAACGGTCAGATATTTCTGCGAAGCCAAACTTGTATAAGTTGCTCTATGCGTTTCAAATGAA TCAGCATAATTGGGGACGAGCGGCAAACTACATGTACCTTTATTCAGCTCGTTTGAGAACTGAAGCCGCTTTGAAAGATCACCAAGGTGGTTCCTTGATG TTGCAAGAGAGGCTTAATGCACTTTCTGCTGCTGTCAATGCACTGCATCTTGTTCATCCTGCATATGCTTGGATTGATCCACCGTCTGAGGGAAGTTCTG CTTTGAGTGAACATTATCCGAGCAAGAAAGCAAGAATAACACCAGATGAACATTCTGATAATGATTTTGAGTCTCAAAGCTGGAAGCCCTCTATCGATAT TGAAAAGCTTGAGAATGAGTTCGTTCTAACTTCAGCAGAGTATATGCTGTCCCTGGTAAATGTCAAGTGGACATTTAATGGAAAACATGGAGCCCTATCG GATTTGGCTGATCTTCTTGTCCAAAACAATTTATATGACATGGCCTTTACAATTGTTCTCAGATTTTTCAAGGGTTCAGGACTGAAGAGGGAACTGGAAA GAGTTCTATCTGCCATGTCATTGACATGCTGTGTTGATAAAGTAGAATCCACTCGGGTTGAGGAACATGGTCATTTCTTGACATCATCAAAGCTTGAGAT GGTTGTCCATGGTTCACCTGTTACAGGTCCTACAACTCCACAAACTGACAGAAATAGCTTTTGGGCAGCTCTCAAGCTTTACCTCGTTCGTATCTTCTCC ATCTTCTAATGTGCTGGCCCTTATTAGATTTTAGCCTGTTTGTCAGCCTTGAAGGGACGGCGGATGCATGATTGGATGAAATTTCACACCATACTGCTCC AACCTTCTCCTCTCTTGCCTTCTGATTCCTTTTGAAATTTCACACCATACTGCTCCAACCTTCTCCTCTCTTGCCTTCTGATTCCTTTTGAAATT BLAST |
Tissue | pods |
Gene name | LI_gene_159267; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304130
Blastp | Nuclear pore complex protein NUP160 from Arabidopsis with 51.27% of identity |
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Blastx | Nuclear pore complex protein NUP160 from Arabidopsis with 51.03% of identity |
Eggnog | Nucleoporin 160kDa(ENOG410YYM5) |
Kegg | Link to kegg annotations (AT1G33410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461186.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |