Ll_transcript_304088

• Id Trinity: TRINITY_DN48234_c1_g1_i2
• Name Transcript: Ll_transcript_304088
• Sequence: AAAAAGTTGAAAGCATAGCTCTTCAGCTGTTAATTGACAGCACGGAAGGAAAAAAATATGCTTTCAGTCTGAATTGGTCTGTCCGCAAAATTGGGTCTCT CAATAAAACTGTGGGCAACTGAGATTTTTTATTTTTATTTTCAGTGGAAATATTTTGCTTCCACTTTTTGAGGTTTGTGCGATTTTTTTATTGACAAGTG GCATAGATTCTTCTTCTGCTTTCCACTTTTTGTTGCTATTATCATATATGCTTTTTCAGGTAAGAAACTGAAAAGAAAAGTGCATTTTTTATTGATATTT GAAGTTAAGGAAGATCAAAATCAATGCTTTTTTTATGCAGCCCATCATTCTTGGTCATTAATAATGTGCTCAATTTGGTAAGTTTGTATCCAGTTGCAGT AAATTTGGTAGTAAAAGCTCTCTGAGATGATTGCATTTATGGAATCAAAGGAACAGACAAAAGAGATCGAGAAGTGTTTGGATCCTCAGCTATGGCATGC CTGTGCAGGTGGGATGGTGCAGATGCCACAGGTGAACAGCATGGTCTATTACTTCCCTCAGGGTCATGCTGAACATGCATGTGGTCCAGTGAATTTCATG ACTTGTCCCAAGGTTCAACCTTTGGTTCTTTGCACGGTTGAAGCTATCAAATACATGGCTGATCCTGAAACTGATGAGGTGTATGCCAAACTTAGGCTTA TTCCTGTAAATCGGAATGATGCAGATTATGCCTGTGACAGTGCTGGGGGCATCAATGGGTCTGAGAGTCAAGATAAGCCTGCTTCATTTGCAAAGACCTT AACTCAATCCGATGCAAACAATGGTGGAGGGTTTTCTGTTCCTAGATATTGTGCTGAAACAATTTTCCCTCGTCTAGACTATTCGGCTGAACCTCCGGTT CAAAACATCCTTGCCAAAGATGTTCACGGTGAAACATGGAAATTCAGGCATATTTATAGGGGCACGCCGAGGCGGCATCTATTGACTACCGGGTGGAGTA CTTTTGTCAATCACAAGAAGCTTGTTGCCGGGGATTCAATTGTGTTTTTAAGAGCAGAAAATGGGGATCTATGTGTTGGAATTCGGAGAGCGAAGAAAGG CCTTATTGGTGGACCTGAGGGTTCATCAGGGTGGAACCCTGCAGGTGGGAATTCTACTGTGCCTTATGGTGGACTTGCAGCATATTTGAGAGGGGATGAT TTGAATAGTCTCCTGAGAAATGGTAACAACAGCAATGGATTGAATTTGAACCCGCCGAATTCGAGTATGATGGGGAAGGGAAAAGTGAGACCAGAAGCAG TTATTGAAGCTGTTACTCTTGCGGCAAATAGGCAACCTTTTGAGGTTGTTTACTACCCTCGGGCTAGTACTCCGGAGTATTGTGTGAAGGCCTCTTTAAT TGAAGCAGCATTGCATAATAGGTGGTGTTCTGGAATGAGATTCAAGATGCCCTTTGAAACTGAGGACTCCTCGCGGATAAGTTGGTTTATGGGAACCATA TCCTCAGTCCAGGTTGCTGATCCCCTTAGCTGGCCTACTTCACCTTGGAGGCTTCTCCAGGTTACATGGGATGAACCAGATTTACTTCAGAATGTGAGAA GGGTGAGCCCGTGGCTAGTTGAATTGGTATCTAACATGCCTGCTACTCATCTTTCACCATTCTCACCTCCGCGGAAGAAATTGAGATTTCCCCAACACTC AGATTTCCTCCTTGATGGCCAGATTCCAATGCCAACATTCCCCAATAACCTTTTAGTTCCCAACAACAACAACTTATTCAGTTATCCACCCGAAAGTTCT CCTGCTGGCATGCAGGGAGCCAGGCATGCTCTTTATGGTTTATCCTTACCGAGCCTCCACTGCAATAGACTGCAGTCAGGTCTAATTCCTTCCGGTTTCC CACCTCCTGATCATGCTGCTACACCAATGCGAATCATGACTAACGTGTTATTTCAAAAGCCCAGCATGAGTGAGAATGTATCTTGTTTATTATCTATGGC AAGTTCTACTCAATCTACAAAGAAAACTGATGGTGTAAGGACACCACCCCAGCTTGTACTCTTTGGCCAAAAAATTCTCACCGAACAGCAGATCTCTATG AGCAGCTCGGGGGACACGGTATCCCCAGATGGAAATGCTGATAAATTGAGCAAATTTTCTGATGGTAATGGATCAACTCGTCATCACCACGGCCTACAGG AATGCTCCTTTTGTGAAAGGTACCCTGATAACCACCAAGAAACTGAGGCCAGTTTGGAGATTGGTCACTGTAAAGTTTTTATGGAATCGGAAGATGTAGG TCGGACAATGGATCTCTCATTGCTACGGTCTTACGATGAACTTTACAGAAAGCTGGCAGACATGTTTGGCATAGAAAAGTTCGAGATGCCAAGTCATGTG CTCTACCGTGATTTAACCGGGTCAGTCAAACACATTGGAGATGAACCATTCAGTGACTTCACAAAAACAGCTAGGAAGTTAACTATATTAATGGATTCCA GCAGTGACAATGTAGGAGTGTAGTAGAAGAAAATAATCAAATTCTTCCCTTCTAAATTGTAAAAGCTGGTTCATCAAATTCTCTTTTCTCATTTTGACTC CTTACTCCTTCATGAACCAATGGAAGAAGCTAAGGCAATCTGATCTAATTTTTTAATATAAAACTCTCTACATAATTCTCTCCTATATCTTGGAGGGGAT CTTTGGATTTTGGTATTTTATTGTAGTGAATTGTGATCATAATTTTGTTTTGTCCCTTCTCTTATTTGATCTTAATCTAGCCTAATGGCATTCTCTTCAA AATTTTGTTGGATGAAAATGATTGATAAGTGGTCATAAA
• Tissue: pods
• Gene name: LI_gene_159270;
• Additional information: details;

Expression of Ll_transcript_304088

FPKM

• PAB: 0
• PNAB: 0
• PS1: 1.1
• PS2: 0.7
• PS3: 0.6
• PW1: 0.6
• PW2: 0.5
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304088

• Blastp: Auxin response factor 18 from Oryza sativa with 59.86% of identity
• Blastx: Auxin response factor 18 from Oryza sativa with 59.19% of identity
• Eggnog: auxin response factor(ENOG410ZZ2C)
• Kegg: Link to kegg annotations (4341882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461780.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;