Id Trinity | TRINITY_DN48240_c3_g1_i8 |
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Name Transcript | Ll_transcript_302565 |
Sequence | CTCTAACTTGGGCGCCATACAAAATCTCCAACCTCTCTTATGATCTCTGCCATCCCCTTTGATTGTTAATTAACGATAACGACGAAATCTCCACCATTGT CTCCCACTTCAGTTTCTCTTCCATTTTCACACCCATCACACAAATCAATAAACATAACTAATTACTGGTAAATTAAATACACGGATATATTACTAAATTA ATATTAATTTCACTTTCCCATCTTTCTTTCTCTCCCGTTTTTTCTTCTTCCGGGAGAATCGAATTCACGACCAAAAACCAGAAAGACTGACGGGATTCGA CGCTGACTCTGAATTTTTTCATTCATTATTTCTTCAATCCCATTTTCTCTCTCTCTTTCGGTGGTGGTGTTGATCATTGCCTCCCTCTTTCTTCTTCCTT GCATGGTGATCATAGATAAACCCATTTGTTCTTGGCCAGAAACGGAAACCCCATTTAGAAAAACGTCCAAAAATCGAAACTTGTTGAATTCGAATTTTGG GTGCCAAAAATAATGGTACCCTTGTGTTGAACATGGGTTAGTTAATGTTCTAGAGAGAGAGAGAGAGGGAAAAAAAGAGACGGATAGAGAGAGAACCATG GAGGAAGAGTTCGAGGTGATTGAGGTTGAGGTTGATGCATCTATGTGCTGTGATGAAATTGAATTTGATTATGAGTTTGATGCTCCCCGGTTCTGTGATT TCACGATACCTGAGACGTTTTGGGATGCTTCTGAAGCGGAACAGTGGTTTGAATATGCTACAAGTTATCCACCTTCACCATTTCTCTTGAAGTTTAAATT GAGAAACACGGGTGGAATGGAAATTGTTAATATGGCTGCGGAAGATTATGGTCCTTGCATGGAGCATGAAAAAGTTTCAGAAATTGATGACAATAATAAC ACAGTAGAAGATGTTTCAAATGGTAAAACAAAGACCCTCAGCAAGTTAAGCCAATCAATATCTAAAATTTCACGTTTGATGAGGCCAACAGCAAGTCATT TGGCCAAGCAGAAGAACCCTACAGATGTAGTCCAAAGCAGTCCTTCCAACGGAAGGTTTCTGAGTCGGAATTCTTCCATAGATTACCAATTGACCAAAAG ACAGAAGCTTGAAGCTGGTTACTTGAGCAAGGTTGCTCGTCTGAAGCATCAAACTACTTTTATGCATAAGAAACCTAAGGAGGTTGATTATGCTGACAAC AATGTAGCATCTAAATCAAAAGTTACTATCCCTAGAGAACCTAATCTTGAGACAGCCTCCAGAGCACAAAGACACAGGTCTAAAGCTAATGCTGAAACCA ATGGAGATACAAAGCCAAGTTCTAATATGTTTAAAGCACGGCCCTTAAATAAAAAAATTTTGGAGGCTCCAACACAACCTTCGGATAAGAAGAAGACATT GCGGCTAACAGAATTTAATGCATTTCACTTTAGAACATCTGAGAGGGCAATGCAACACACATCTAGTAATGCTGGAGGTACTTTGAACAGCAACTCTGTC TCAAATAGTGAAATAAGAGATATCAAAAGTGATTGTTCAAGGCAGGAAAAGTATAGAATGGTTAACAAACTCCGAGGAAGCCCCGACGACAAGCGACTCG CCAGTAAAGGGCAAAGAGGTGTCTTCCGAAATATCAAAGTATTTCCATTGGAACAAAATGACAAGAGGATTCTAGATGAACCTCCTGCAGAATTATTTAG CAAGCTCTCTCTGGCTTCTGATGTAAAACTAACTACAAAACCGCACGCAAAGAAGCTGCCAGTTTCTAAGGGCTTGAAGGAGAATAGACCTGGATCTTTA CATCAAGAAGAGCATGAGAAGATGAAAATGATCAAAGAAGGAGATCAGAGACAGTGTAGGAAGCAGGATCAATGCATGAATGAAAAGGAATCCCTCATAT CAAAGCACACATGTATCTAGCAAGTAGAACAAAATCTAAACATAATTTGCTTCTGATCATTTAGAAACTATGCAAATGACACAAGTCTTGTTTTTGACAC AGGATGTTGGAGTTTAGCTGAATTTTGAATGGTGCTTCTTCTATTTGGTGCTCATTAGTGTAGATACATCTGCTTATATGCCACTAAAATTGTCATCAAT AATTGGAACTTCAACTGTTTCATACTGGAAACAATCTTTCCAAGGGGCTCTTATTTGCTAATCAATGGCAAGGGGATTCTGAAGTTGCAAGATGATGGAA CTTAATGCATGGCATTGTACAATAAAGCATTAGAGTTTTGACATTAAGTCTTTCAAAATGTAATCTGCTAAAGTGAGGCTTCAAAATGTAAATGGTTTCT GCTTTCACTTACTGCTCTTTGTAATTTCACAGCATTACTAACTAGAAAAGTAAGCCCTTTTTGGCCCACACTCCTTTTAGTGTCACTCTATTTATATACT ATTTCTAGTCATACAGGC BLAST |
Tissue | pods |
Gene name | LI_gene_159317; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302565
Blastp | Protein TPX2 from Arabidopsis with 31.07% of identity |
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Blastx | Protein TPX2 from Arabidopsis with 31.07% of identity |
Eggnog | Cell cycle regulated microtubule associated protein(ENOG410ZTMD) |
Kegg | Link to kegg annotations (AT1G03780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450269.1) |
Pfam | Cell cycle regulated microtubule associated protein (PF12214.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |