Id Trinity | TRINITY_DN48247_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_303119 |
Sequence | AAACACACCTACTCCACTCTTTTCAATTAGCGCGGGAAATTGTTCATGAATCGACTCTAGCAATGGAAGAATCCCCCAACATCGCGAGGCTAGGGGACCT TCTCCGCTCCCCTCGCCCTGTAACCGCCACCGCCACCGCCACCGCCACCGCCACCGCCACCGCCTCTCCCCACTTCCCTTATACCGCCTCTCCTCCACCT CCTCCCCCGCCACCGACGCTGCGTCCAACCGACCACCATCGCGTCATCACCTCCCTCAACCGCGCCACTATCATCGTTGGAACGCTAACCCTCCCCGCTT CTTCCTCTCCTCCTCCCTGCTCCTGCTTCCGATTCTCCGATTCCTCCGCCACCGTCTGCTGCGACGTTCTCCGTTTCCTACCGTCTTGTATAGGCAAGGA AATTCGCGTAACCGCTTGGAATTTCATTCCACTTAAGCACTACTACCGTGGTGGCAGTGGCGGATTCTTGGAGATTATTCAATGGTCGTTTTCGGATTCG AGTGAGGGTTTAAAGGGACTGCACTATGTGGATTCACTTCCACTGCTACCAAATCATCGCAATGATGATAGTTCTAAAGCACGGTATCATGTCTTCGGAG TGGTGGAATCGGTTGGTCCCATTTCTGTGGTACCGTGTTCCATGGCTGTGAGTATTTCTGATTCGAATTCGAGTTCTAAGGTCAACTTGCCTGGGTTTTT GGTACAATTGATGTGTTGTGAGTGTAGGTTATGTTGTTCTAAAGACTGTAATACCGATTTGATAAGTCGTACATTGGCCGAAAATCAAAATGGGAATGGT CATTCTTTTACTAAGATGCAGATTGTTTATTTTTGTGGCAATGCATATTCTTGGCACGCTGCGATGACTAAGCTAATTTGTATGCGAGTTATGGTGTCTT CTTTGAAGAAAAAGTTGATTTACATTACCAAGGATGAGTCTCGTGTGATGTATGTGACCACGGACAAGTCAGTTTTTCATGTTTGTCGGTTTTCTGAGAA ATGGATGCAGTGCCCGAAGAGTGATGATATCATGGGGAAGGGCGAATGTGGTACATATACTGGCGTAATTAAAGATGTCTACATGCAAGGGTTGGCTTTG GAGTTGGACCATGATGTATGGCTTCTATTAACTGATGAACTTCGTACTTCTGTTCATGGTCTAAGAGTTGGCACCATTATATCTGTGAGAAATGTCCATT TCATGGATCCGAAGTTTTCATGGACAAAAATTATTATTCTTGGGGCTTGCATAACGACAAGCATAATTGTGGAATCCTTCTCCCCACTGGAAACTGGGTG TAATGTAGTTTTGCAACCTCGAAGTGTGCTAGGAAAGTTCATTCAGTCATTACCGTTTTCTGCAAGACTCTGGGTATTACTTCTTGTCTCAAGCTTACGT AAAAAGTTTGCTGGTATCTTATCTGACAAGGAGATTTTGGGAACACAACATAAAGAAGGCCTAGTTCAGATGTGCGCTAGTTCATTGTTACCACCATCAA TTTTTCAAACTGAGCATGGTGCTTTCATTGGGTTTTGTAGGCATGACTTAAATGGCTGTGGTAGAGAAATGCACTGTGATTTCCTGAAACTGATAATACC AATGTCTATCTTCATCTATCACTGTATAGATACATTTAAGAGAAAGCTAAAGTTGGAAAACCACCATAAAGTATTGCCTGTTGGCAACCATTCCAAATTT TTATCACATGAAGCAAGATATGATGGTAGATCAGTTAGGAGGATCATTTCAAGTAAAGACGCCAGCATTGTTTTGATTGGATATCTAAAGGTCAATCCAT CAACTAAAAGACTACAGCTGGTTGATGCGACTGGTGGCATTGATGTTCTTATACCAGACCTTCCCTTTGCTTGGAATCCCAACAAAATATATGAGGGGAA AACACAAAGGAACTTTCAGAATATTGTATAAGTGATCACAATAAGGAACGAGTATCAAATAAGAGGCAGAAACTTGCTGAGGAATCCATAAGTTCATCGA TAGACGAGTTTCACACTTCCATCTATAAGCTGAGTCCTTGTTCTAATTCTTCCATGAAATCAAAAGAGATAAAAAAATGTCTCGAATTGAATTCTTCTCA TGATATATCTTGTCTGGTCACTTTTAGAAGCCTTCAAAATGAGAAAGTCGTTTGGCCAGCAATATTGCACTCTACATCACCTCTGAAAGATAGAGGTTTT AAATCGAAACCAAGTGCAAGGAAAATTTTGTTGGAGTTCTCATTTGAAAGGTTTTTGAAGTATCAGTTGTTGCAGATTGGTGGTTATTACATCATAGAAC ATAATAGAAAAGATTGCTTCTGCACTACAAAAGATGCTGGCTTTGGTAGCTGTTCTAAATTTCTTGTTGATTCTGGAAAAAATATCTGGAGCCTTTCATT TATTTCTGATGAAGTACTTCTCAATTATGAATCAATATACAAATCTGCAGAAGACTCTTTGTATCATCCTAGCATTGATGGGGTTTTGCCTAAAGATCAA ATTGAGCAACTTCTGCTGAAGTCTAATATTGATTATTCAGGTGTCTATTCAGATGTTTTTCTATATCTTCCAGTGAATTTTACAGGTCTCTTGGAAGATA ATATTATGGAATCTAAAGATAGTCAAAGCCAGCAAGATGCAGTATCAGAAGAGAGTGCTAACATTCCTTTGAGCAATGGGACTGTAGTGGCTAAGCCTAC TCTTTGTTCTGGGTATCAGAGTCCAAACTGCCTGTTTCCTGAGGGCAACTTAGTTTCCTTTGAGGGCAATGTGGTTGAAATTCAGGACATGGGCTCTAGT TTCAGTAATTTATGTTTAAGTGGAAGCCTTGATGCTCTTCGGTTGAAAGGCCTCGTTGGAACTAAAAGTAGTTTCTGTGTTCATGTGAAGATTTTTGGTT CGATAAGCAAACATGATTTTCCTACTGGTTTTGGACCTGGTGTAACTGCAACATTTCATCGAATTCTTGATGCAAGGTATGCGCCAGAAGCCTTAACGAG AGATAATTGGGCTTCAATACGTGTTTCACTATATTGTTGAAGTAAAATTAATGTGAGGAATGGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_159387; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303119
Blastp | CST complex subunit CTC1 from Arabidopsis with 40.55% of identity |
---|---|
Blastx | CST complex subunit CTC1 from Arabidopsis with 40.04% of identity |
Eggnog | CST complex subunit(ENOG4111YBP) |
Kegg | Link to kegg annotations (AT4G09680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427313.1) |
Pfam | CST, telomere maintenance, complex subunit CTC1 (PF15491.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |