| Id Trinity | TRINITY_DN48247_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_303120 |
| Sequence | AAACACACCTACTCCACTCTTTTCAATTAGCGCGGGAAATTGTTCATGAATCGACTCTAGCAATGGAAGAATCCCCCAACATCGCGAGGCTAGGGGACCT TCTCCGCTCCCCTCGCCCTGTAACCGCCACCGCCACCGCCACCGCCACCGCCACCGCCACCGCCTCTCCCCACTTCCCTTATACCGCCTCTCCTCCACCT CCTCCCCCGCCACCGACGCTGCGTCCAACCGACCACCATCGCGTCATCACCTCCCTCAACCGCGCCACTATCATCGTTGGAACGCTAACCCTCCCCGCTT CTTCCTCTCCTCCTCCCTGCTCCTGCTTCCGATTCTCCGATTCCTCCGCCACCGTCTGCTGCGACGTTCTCCGTTTCCTACCGTCTTGTATAGGCAAGGA AATTCGCGTAACCGCTTGGAATTTCATTCCACTTAAGCACTACTACCGTGGTGGCAGTGGCGGATTCTTGGAGATTATTCAATGGTCGTTTTCGGATTCG AGTGAGGGTTTAAAGGGACTGCACTATGTGGATTCACTTCCACTGCTACCAAATCATCGCAATGATGATAGTTCTAAAGCACGGTATCATGTCTTCGGAG TGGTGGAATCGGTTGGTCCCATTTCTGTGGTACCGTGTTCCATGGCTGTGAGTATTTCTGATTCGAATTCGAGTTCTAAGGTCAACTTGCCTGGGTTTTT GGTACAATTGATGTGTTGTGAGTGTAGGTTATGTTGTTCTAAAGACTGTAATACCGATTTGATAAGTCGTACATTGGCCGAAAATCAAAATGGGAATGGT CATTCTTTTACTAAGATGCAGATTGTTTATTTTTGTGGCAATGCATATTCTTGGCACGCTGCGATGACTAAGCTAATTTGTATGCGAGTTATGGTGTCTT CTTTGAAGAAAAAGTTGATTTACATTACCAAGGATGAGTCTCGTGTGATGTATGTGACCACGGACAAGTCAGTTTTTCATGTTTGTCGGTTTTCTGAGAA ATGGATGCAGTGCCCGAAGAGTGATGATATCATGGGGAAGGGCGAATGTGGTACATATACTGGCGTAATTAAAGATGTCTACATGCAAGGGTTGGCTTTG GAGTTGGACCATGATGTATGGCTTCTATTAACTGATGAACTTCGTACTTCTGTTCATGGTCTAAGAGTTGGCACCATTATATCTGTGAGAAATGTCCATT TCATGGATCCGAAGTTTTCATGGACAAAAATTATTATTCTTGGGGCTTGCATAACGACAAGCATAATTGTGGAATCCTTCTCCCCACTGGAAACTGGGTG TAATGTAGTTTTGCAACCTCGAAGTGTGCTAGGAAAGTTCATTCAGTCATTACCGTTTTCTGCAAGACTCTGGGTATTACTTCTTGTCTCAAGCTTACGT AAAAAGTTTGCTGGTATCTTATCTGACAAGGAGATTTTGGGAACACAACATAAAGAAGGCCTAGTTCAGATGTGCGCTAGTTCATTGTTACCACCATCAA TTTTTCAAACTGAGCATGGTGCTTTCATTGGGTTTTGTAGGCATGACTTAAATGGCTGTGGTAGAGAAATGCACTGTGATTTCCTGAAACTGATAATACC AATGTCTATCTTCATCTATCACTGTATAGATACATTTAAGAGAAAGCTAAAGTTGGAAAACCACCATAAAGTATTGCCTGTTGGCAACCATTCCAAATTT TTATCACATGAAGCAAGATATGATGGTAGATCAGTTAGGAGGATCATTTCAAGTAAAGACGCCAGCATTGTTTTGATTGGATATCTAAAGGTCAATCCAT CAACTAAAAGACTACAGCTGGTTGATGCGACTGGTGGCATTGATGTTCTTATACCAGACCTTCCCTTTGCTTGGAATCCCAACAAAATATATGAGGTGAA ACAATATGATATTGTTGTTGATGGCATAGCTGAACTTGTAAATCACTCGAAATTGCTTGAGAGTGGGTCATTATCGTGCAAAACAATCTTTAATTGCACC CAAGCAACAAGAAAGTCAAGCACATCAATTTTTGCCTACTTTCTTTGGAAGAATGCTAATTGCAGAAAATTTTCCCTTTACCCTTATTGCAATAGGATGA ATGAAATTGGGATTCTTGAATCTGGATCCTATCATTTGCTTAGGGTATCTCACAAATTTCCTAGTAATATGAGATCAAATAAGTCAAGTATTTTTGCTGA AGCCATACTTTTGCCTTATACCTTATTGCTTGTTGGGAAGAGTGGGGTTTCACATTCATGTAATGCTTCAGGGGAAAACACAAAGGAACTTTCAGAATAT TGTATAAGTGATCACAATAAGGAACGAGTATCAAATAAGAGGCAGAAACTTGCTGAGGAATCCATAAGTTCATCGATAGACGAGTTTCACACTTCCATCT ATAAGCTGAGTCCTTGTTCTAATTCTTCCATGAAATCAAAAGAGATAAAAAAATGTCTCGAATTGAATTCTTCTCATGATATATCTTGTCTGGTCACTTT TAGAAGCCTTCAAAATGAGAAAGTCGTTTGGCCAGCAATATTGCACTCTACATCACCTCTGAAAGATAGAGGTTTTAAATCGAAACCAAGTGCAAGGAAA ATTTTGTTGGAGTTCTCATTTGAAAGGTTTTTGAAGTATCAGTTGTTGCAGATTGGTGGTTATTACATCATAGAACATAATAGAAAAGATTGCTTCTGCA CTACAAAAGATGCTGGCTTTGGTAGCTGTTCTAAATTTCTTGTTGATTCTGGAAAAAATATCTGGAGCCTTTCATTTATTTCTGATGAAGTACTTCTCAA TTATGAATCAATATACAAATCTGCAGAAGACTCTTTGTATCATCCTAGCATTGATGGGGTTTTGCCTAAAGATCAAATTGAGCAACTTCTGCTGAAGTCT AATATTGATTATTCAGGTGTCTATTCAGATGTTTTTCTATATCTTCCAGTGAATTTTACAGGTCTCTTGGAAGATAATATTATGGAATCTAAAGATAGTC AAAGCCAGCAAGATGCAGTATCAGAAGAGAGTGCTAACATTCCTTTGAGCAATGGGACTGTAGTGGCTAAGCCTACTCTTTGTTCTGGGTATCAGAGTCC AAACTGCCTGTTTCCTGAGGGCAACTTAGTTTCCTTTGAGGGCAATGTGGTTGAAATTCAGGACATGGGCTCTAGTTTCAGTAATTTATGTTTAAGTGGA AGCCTTGATGCTCTTCGGTTGAAAGGCCTCGTTGGAACTAAAAGTAGTTTCTGTGTTCATGTATTAGTACATCATCATATTGTGAAGATTTTTGGTTCGA TAAGCAAACATGATTTTCCTACTGGTTTTGGACCTGGTGTAACTGCAACATTTCATCGAATTCTTGATGCAAGGGCCCAAAATAAATTTATGTTGCTGCC TGTGTCATTTATTGTAATAAAATCAATAGAAGTGTATGATAAGCAGTGCAGCGCCAGGTCCTCCAATTTAAGGCCTACTAAAGAGCCATGCAATGCATCT CCAGATTCTTTCACTTGTTTGATTTCTCAATTGCATCAGTGCCCTAGTCACAAGCAAATAATGCTTCGTTGCAGGGTTGTTGCAGTCGTTGTTTTAATTC TAGAGATGAAGAGTACAAGTTTAGATGCAGAAACAAAAATTAATGCTAGCGAGACTAATTTGGACATTCCACTAGCTTGTTTTTTGTTGGATGATGGGTC ATCATCATGTTGTTGCTGGGCTAATTCTGAAAGTGCCGCATCCTTGTTGAGACTTTGTGAAGGATCCACTGCTTCTTATAATCTAGGGAATGTTTTGAAG AAATACAAGAGAATTATTGTGAAAAACCATGGGTCATTCATTGATTCTCCTTACCAAGATGTTGTGGTTTCCGTTGCTTCTGGTAATGTCCTTTGCAGTT CTGATGAAAATTTCCTCAAGTTCATAATCTTCAATGCATGCATCGGTAGCGTATGGAATGTAGTTGCTAGTGTGATGGATGTAGAGGAAGTTAGACAGTT GAAAAAAGAATACCAGGAAGAAATGGAGAATATGCAAACCATCCAGAATATTTGGGCCGAAGAAGTCTCCTGCCCTAGCACTCTGGCTGAAGCAAGGAAC ATGATACAGAAACTTACTAACAGTTAATGCTTATCATAAAACTAGTGAAGAATTTGTCTAGATAGAACATTAAGATGTTGATTACTAACACTAAAAGAAA GGCACGGTTGAGATTAGTTGACAATGATACTTTTGTAAGGAGATTGTAGAGTACATGAGTACATAGAGTACATATGAGGTTTGTCTTATGGCACACACAT CCCCTTATTATAAAAAATGACGCATATCTCTTTGATTTGTTTTCTAAGTTGCACATGTTTGATGCTACAAATGTTTGTAAATGGCATTTATGACCCTAGA GGGGTTGTGAATCATTAAGGCAAACATGATGGTTATAGAGTACAATTTCTATATGGTTAGGATTCCTTAGTAGTCATTTTCCTTTTCTCGAATCTCATTT GTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_159387; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303120
| Blastp | CST complex subunit CTC1 from Arabidopsis with 34.36% of identity |
|---|---|
| Blastx | CST complex subunit CTC1 from Arabidopsis with 33.91% of identity |
| Eggnog | CST complex subunit(ENOG4111YBP) |
| Kegg | Link to kegg annotations (AT4G09680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427313.1) |
| Pfam | CST, telomere maintenance, complex subunit CTC1 (PF15491.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |