Id Trinity | TRINITY_DN48256_c1_g1_i16 |
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Name Transcript | Ll_transcript_304306 |
Sequence | ATAACCCTGAATCTCTATTCGTTTGTGTTTGTTTTCATCTCATACCTACTCAGATTTTCATTCCATTCCATTCCATTCATGTAATACCTTTCTCCTTTAT CAATTATATCAAATCAAAGCGTTATCATGGGAAAACGTAACTCTCAACGCAAAAGTGCTGCTGCTTCTTCTGCAATGTTCGATAGCGATGACGATAGTAC CGTTACTTCTTCTTCAACTGCACGCTCTGATCTTATGTCCCTCTCTGGAACTGAAGATGTTCAATTTGATCAAGATTCTTTGCTTGATCAAGCTCTCGAT GCATTAGATGAGAAAAGGTTTATTATGTATTTATCTACACAAATTTATATGCACATGGAACTGAGTTTTCAGCTTCTTTTTATTTTTTTTAATTTTTATG TTGATTGCTTTTTTGTTTGGAGGAATATAGGAGTTCAACGAGGGAGAATGCTTTTTCATCCATAATTGAAGCATTCAATAGCAACATGCAGCATCAATTT GTTGAAAAGAAATTTGCTACCTTGTTACATCAATGTCTTGCTTCAGTCAAAAAGGGGTCCAAAAAGGCATCTTCCAAGGAAATAGGTTTGGCTGCTCATG CCATTGGTTGTTTGGCTTTGACTGTTGGATGTGGCGACAATGCACATGAAATATTTGAAGAATCAATACGTCCCATTGATGAATCTCTAGCATCTAAGTC AGATGTTTCAAAGATACCATCGTTGCTGGAGTGCTTGGCTATAATCACTTTTGTTGGAGGCAATGATCCTGAGGAAACAGAGCGGTCAATGGATATAATG TGGCGAGTGATCCTTCCTAAATTAGGCTCCAATGTAGTTTCAGTCAAACCTTCTGCTCCATTAATAACTGCTGTGGTGTCTGCATGGTCTTTTCTTCTCT CTACCGTGAGCAACTTGAAGCTAAATTCAAAGAATTGGCAAAATTCAATATCCTATTTATCTACTCTTCTAGACAAGGAAGACCGGTCTGTACGTATTGC TGCTGGTGAAGCACTGGCTTTAATTTTTGAGATTGGAGTTATAGATAAATATTCTGCTGAGTCTAGGAGTGCAAGTGTTACAACTGAAGAAGAGATCAAA CCACATGAAAGTTACATATTCTTACAAGGATTGAAAGGGAAGGTCATAAATCAATGTAAAAGCCTTGCTATGGAGGCTGGTGGAAAAGGCTCTGCTAAAA AAGATCTCAATAGTCAGCGGAATTTGTTCAGGGATATCTCAGATTTTTTTGAGTATGGCTACTCTCCTGAAATCTCAATGAAAATTGGGGGCGATTCACT GCAGACATTGTCATGGTCCCAAATGATACAGTTGAATTTTATCAAGCACTTCCTGGGGGGAGGGTTCACTAAGCATATGCAGGTTCAGCTTTCTCTTGGA TCTTTCTTTAGCTAGCTTCTAATTTTGAAAAGCTTACAATATTGATGATCACATTTTTGTCCTTTTCCCTTGTCAAATTAGGAAAATGAGTTCCTTCATG AGGTCTTTGATTTCACACCAAAGAGGAAGGGTCTGAATAACAACGTACATAGGATGTCTGATCTTGAAAAGCGAATGTTCAAGTCTCCAAATTCGGCACT GAACAAGGCTAGGACCCAATTTCTTGATAAGCAGAGGATGTTAACTGAGGGCAGAAAGGTCGGCCATTATGCAGTGAATATGGTTGATGACGAGGCGTGA GTCTGAGTTGGAACAAGAATCATTTTAGTTTGATTTGGAGATTCAATGGCTCATTTAGTATAATATTCATTGCTTATGCTCTGCAGGTCTTTTGACTTGA TCAATTGTAAACTAGACCCGCGAGACATAAGATTTATAATAATGTGATAATATCCTTAAAGGAAAAAATAGTATGTTATACATATCGATATGGCATCAAG AGAACTCTTCATTTTGTTGCCATCTGAAAGCGTTAGTGTGTAAATATTTCCTGGTCACGTTTGTTTACTTTAATGCAATAAACCAAAATCTGTTCAGAAA GAGTGAATTGTGTTGCACATAAAGAGTGCACCCATTCAATGTTACTTTTTATGTTTTAGTTCTATAATGGTAGGAGGGAAAGTTTATCTCTAGAAGAAAA GTAATCAAGTGTTAAATCTCTTGGATTAGATATTTTCATTTAACAACTGGGTGGATATTTGTTTTAAGTGTGCA BLAST |
Tissue | pods |
Gene name | LI_gene_159477; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304306
Blastp | Interferon-related developmental regulator 1 from Sus with 24.84% of identity |
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Blastx | Interferon-related developmental regulator 1 from Sus with 23.97% of identity |
Eggnog | Interferon-related developmental regulator(ENOG410XSIZ) |
Kegg | Link to kegg annotations (493185) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417685.1) |
Pfam | Interferon-related developmental regulator (IFRD) (PF05004.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |