Id Trinity | TRINITY_DN48257_c1_g1_i6 |
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Name Transcript | Ll_transcript_302117 |
Sequence | AGCAGACTTATGTGGAGGGGGCATGTTGGGAAGTAAGTCCCACATCGCCTACCACATTGTCCCTTGAAAACACTTGTTATTGGTTTCATCTAACAACAAC TCTTTCAGACAACTATTTACTACTCCCGATGGTGGAACCCTTGCTTTGGACTGGCTAATGGCTTCTGATGTTTCTGGTGGTGCTTTCCATACGGATAGTG TTTTTTCTGAACATGAATCGACTCCTATTGTTGTAGTCATTCCTGGTCTAACTAGTGACTCTTCATCTGCTTATCTCAAACATCTTGCATATCATACAGC AAAGCGTGGATGGGATGTAGTTGTCAGCAATCACCGAGGACTGGGAGGCGTTTCAATCACGTCCGATTGCTTCTACAATGCTGGATGGACTGAGGATATC CGCACAGTGATTAATTATCTCCACAAAGAGCAACCCGGAACTACTTTATTTCTTGTTGGAACTAGTATTGGAGCTAACATTCTGATAAAATTTCTTGGTG AGGATGGTGAGAATATTCCTGTAGCTGGTGCTGTAGCTGTTTGCTCTCCTTGGGACCTTTTGATAGGTGACAGATTTATAACTCGCAGAAGGGTGCAGAA ATTTTATGATAGAGCACTTGCAGTTGGACTTCAAGGTTATGCAAAATTACACCAGCCTCTCTTTACCCGCCTTGCTAATTGGGAAGGGATAGAAAAGTCA CTTTCTATTCGTGATTTTGATAACCATGCAACCCGCATTGTTGGGAAGTACGAGACTGTTGATACCTACTATAGACGCTGCAGCAGTTCTATTTATGTGC AATCTGTGTCACTTCCGCTTCTTTGTATTAGTGCTCTGGATGATCCTGTCTGTACCAGGGAAGCCATTCCTTGGGATGAATGCAGGGCAAATAAAAATAT AGTGTTGGCTACTGTCAAACATGGAGGACACCTGGCCTTCTTTGAAGGAATAACTGCATCCAGCCTATGGTGGGTAAGAGCTGTTAATGAATTCCTTAGT GTACTACACTCAAGCCAATATATGCATGTACAGAAAAAGATGTCTAAACCAAGCACACCAGTGCATTCATCAATTGATCAGGGCCCTTATGTTAACATTA CCGAAGACGGAATGGTAGCTGCATTGAACAAAGAGCCGACAATGGACAATGTGGAACAATTGCATGAAAGCCATGACAGGGTTCCAGAGGAAAAAGTTAA TGAACAAAATGCGCTTGTTACTAATGCAAAGAGCGGTGATTCCTCTGGTGCTGCACCAACGTCTAGTACACATGACGCAATGGCTCTTGATGTAATAAAA CCGTTGAAAAGATACATTGGCCAGTTATCTCGACAAAGTAGATGGTCCTTCTGGTTGCTGGTTTATATTGCTATTACCACAAGTTGGCCGCTGGTGGGTT CAGCGCTATATTTTGTGTTTGGGAAAAAGCTGAGAGATATCTTACTAGGTGGTTTTCCCAGAAGATAATTGCATGATCACAAATATTATTGTTGTGCATG TAGCCGCATGCTGTATTACTATTTCTTTGCCTTGATATCAAGCAAAATCTGCATTTCTAAGCTTTTGGTGAAATTAATTGGAACATCAGTGGTTTACAGT TTTCCTTAAACCACTGTTTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_159484; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302117
Blastp | Embryogenesis-associated protein EMB8 from Picea with 34.83% of identity |
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Blastx | Embryogenesis-associated protein EMB8 from Picea with 33.73% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428779.1) |
Pfam | Serine aminopeptidase, S33 (PF12146.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |