| Id Trinity | TRINITY_DN48257_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_302129 |
| Sequence | CTTTAAGTTGTTATTAGTGCATGAGTATCTTTTAATTCGTTCAAAAATTAATAATTAAGTAACTAATATTTTTGACCGTCTCTTCTTTTTCTTCTTCTAT GCCTTCTCTTCTTTTCTCTCCATTCTTTGTTTGTCCCGAATTCTTCGAGAAATTAATCACTTTCAAATTCAAACAGACAAAAAAAAGCGAAAATCGACTC CAACAAAACCTTCGTGCTTTTTTAACCACGTAGCTTTTCACATAGACTACACAAATTAAGCTCTTATCTATTATTTTTTTGTTTCTATTTATCAGAAATA TCTTGCTAATCTCAGTTTATGGCGACGCTTTCGCTCGCTCTGAACTGCTGCTGTTGGTGGACTACGGTGGACTATCCTCACACCAGATTTCATTCTGCCG TCATCACTCTCACTCACAGGAGTAGATATAGCACATGTTCTTATGCCAAGAAGTCATTGAAGAAATCCAAAAGAGGTGGACCAGAGGCATTTGGAGATCT CTCAGAAGAGACATTTGTCCAAAATGATAAGTTAGACACTTCTCTTAATTCAGCTGGCCAGGTTTCTAACCCTGTACCTTCAAGAAGTGCCGTGCTTCAG GCTTGCACAATAACTTCAGGTCTAATAGCTGCTTTGGGCATAGTTATTCGGCAGGTGTCTCATGTTTTATCAGCGGAAGGATTGCCAGTCTTGGACTGCT CTACAGAAGTATCATTTGGTTTTGAGATGTGGCATCTTGAGTTGATTGCAGGACTAGTGGTGTTAATATCATCATCTCGTTATTTGCTATTGAAGACATC GCCAGATTTTGCTGAGTCTAGTGAAGCAGCCAATCAGCAGGTCCTTAGCTCACTCCAACTTCTGGATTACATGGTCGTTGCACTCTTGCCTGGGATTAGC GAGGTCAAAAGAGAAACACTTTCTTGGCTTATTAATGCATCTATCTTGTTTAGTTTCCATTATTTGAATGATGTTACATGTTAAGGTCTTTAATTCAGGA ACTACTTTTCCGTGGTGCGATTCTGCCACTTTTGGGAATGAACTGGAAGAGTATTGGGGTGACTGCCTTGACCTTTGGTGTTTTGCACCTAGGAAATGGC CGAAAGTATTCCTTTGCCATCTGGTGCATATCCTTCTAACTTCTCTCTCCCCCTCTTCTCAATCTTTCCCCCACTTATTGAAAATTTTATTGCTGATTTA ATTCCTTTTACAATATCCTCCCAATTCAAACTTGCGATCAGCAAAACTAATGGTCTTATTCAGATTTCAACTCATACAAAATAAAATAGATTTCTGAATG CAATAAAATATTCACTATTCAGTTATTCACAAAGAAAAGTGGTCATTATTGATAAAAATTCAATATAAACTCACGGGAAGAAAGTAGATTTATAAATGCA ATAAAATATACAGTATTCACAAACAGAAGCATCTGGTAAACAATAACCAAACTGCAGTTTTATTACGTGGGGTAGGTTACATGAATCAAATGACATCTTA ATACTCTATCATATATCATGTTCATTTATAAAGGATTGATCTTTAATCAAACAGAAGTAATTGGTTATTGGTAAATATTCAGTATACTTCTAATGTCTAG ACTCTAGATATTAACTAGGTATAAAACATTGGGATCTATTATCCATTATTGTGTTGTTAGTCCTTATTAAATTAAAAATCAAGATTGTTCTTTGTGTTTC AGGGCAACTTTCGTTGGTCTTGCTTATGGATATGCTACAATTTTATCATCCAGCATTGTGGTTCCCATGGCTTCTCATGCACTGAACAACCTGGTTGGAG GGCTTTTATGGCAGTACACGTCAAATACATCAAAACAGAATTTAAATGAGGAATTGCCATCATAACAGATAAACCCACACATCTTTATACAATCAGGAAA CGAAGAAACCAAAAAAAATAGTTGATGGCAAATGCCTGGTGTGGTATCATGTGTAGAAGAACTTAGATGCAAAGACCAACCCAGGAAGCTTTTGTTTTCA AAATAACCAACCACTGGTAGCAATGCTCTCTCCTCCATTTGAAGGAATTTTTTTAGTAATTTGTATATTCGGTTATAGATTTCTGTTGTAATATGTTGTG GAAAACTATCACATATTAACTGTAAATCAATTACTATAATTTGTAGCATAAACATGATCACGTGGCTTGGTTATTACCTACTTGGATTTGTGAATCTCTA TTTTTGGTACATGATTTCATCAGCTAGGGACTCTAACCCTCCAGTTTCTGTTGCCTTAAGGAATATTCCCCTAAAAATAAACTGAAACAGACAGAAAAAG AAAACCAACCCGTGTATTTGATGAATTAGCCACGCAGGATGATAAAATCGTGACAGGTAAGCTTGTGTTTCGCTCCATTTCCTATTCTACTACCTCCTTT ATAAGATGCTTCATTCCAACCTTTTATTTTTCATCCATTCATTTCATCTCTTCTCTTCTTATATATATTTTTTCTTCCTCCTCTTTGTTGTCTATAATTC CTTCCCCCCTGAAATTTGGGTAACCACTAAACATCACAAAGCTTCAATCTTATGGCTTCGTATGAAAACCAAGGAAAGCCTCTACCCAAGTTCGGGGAAT GGGATGTCAATGATCCTGCCTCAGCTGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGAGAAGAAAACTGCTGCAGGAGGATCAGGGCGAATTAC ATCTCAGCGAAAATATGATACACACAAGGATGACGATAAATCCTCCTCCAAGAAAAAATGGTTTTGCTTTAAACCTTCTTAAACAAGGATAAGGATTGTT TTGTTTGTGCTGCATGGGATGTAAATCATGATTCTCTTAGTTTTTGTGGCACCTCACATTTGTCAATAGACCACACAGAATTGAGAGAAGAAAAGAAAAT AGTTGCAGCCTTCTTAATTGCTTGAATCATGGTTGTTTTTACTTTCCTATCATGCCCACCTAATATATCAAGCAACTTGTGCACTACAAACAACAAGAGT AATGCATATGTGATTCAATGACAACCTTTCTGTAATGCATATTTATTTTAATTTTTTTCTTTCATGATTTTGATGTACTCAACAATGAATTCATATAACA CCTAATAAGGCTTAAAACCATCTTTGTAGAGACACCTCTTATTTAATTATAACGATTATGACTGAGATTGTTCTTGTTGGATGTAGACAATGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_159487; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302129
| Blastp | - |
|---|---|
| Blastx | RPM1-interacting protein 4 from Arabidopsis with 39.68% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000616) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463834.1) |
| Pfam | - |
| Rfam | - |
| GO | - |