Ll_transcript_302133

• Id Trinity: TRINITY_DN48257_c2_g1_i5
• Name Transcript: Ll_transcript_302133
• Sequence: GGAAATAAGCACCGGTCGTGACATAAACGCCCTCCAAGCCTTTTAGTTGCTGCTAATCAAAATAAGAGCACACAAAAATTAGAAAACATAACATTAAAAA ACAGAGAGATGCTACATCTATCATGCAACAGTAATAATGGTAATCACTATCTTCTTCTCTTCATCGCATGCCTCGGTTTGATCATAGCACTCAAACATTT CATCTCCATTTCCAAATGGATCTTCAACACTCTCTTCAGATCCGAGAAAGACCTCATCACATGTTATGGTTCATGGGCTCTGGTGACCGGAGCCACCGAC GGCATCGGAAAAGCCTTCGCATATCAGCTAGCACAGAGAGGCCTCAACCTTGTTCTGATCAGCAGAAGCTGCCAGAAGCTTGAAAATGTTGCAGGTGAAA TCAAAGAGAAACACCCTCATACCAAGATCAAGTTAATCCAAATAGACTTTTCAGGCGACATCTCGGCGGGTCTCCGGCGAATAGTGGAGGTGATCCAAGA CTTAGACCTTGGCATTGTGATCAACAACGTAGGGATCACATACCCTGGGGCCATGTATTTTCATGAGGTAGATGAAAAAGTGTGGATGGACATAGTGAGA GTGAACATTGATGGTACCACTAAAGTAACAAAAGCTGTTCTACCAAGGATGATTCAAAGGAAAAGAGGTGCAATCATTAACATTGGCTCTGGTGCTGCGG TGGTTGTTCCTTCTCATCCTCTCTATACCATCTATGCTGCTACAAAGGCTTACGTGGATCAATTATCAAGATCTCTCTACGTGGAATATAGACACTATGG GATCCACGTGCAATGTCAGGTACCCCTTTATGTCGCAACGAATATGGTATCAGAGGTAGCATCTATTAAGAGAAACTCATTTTTCATACCAACACCTGAG GGATATGCAAGAGCTGCAATAAGTGAAATTGGTTATGAACAAAGGTGCACACCTTATTGGGCTCACTCTATTCAGTGGTGCTTCGCACGCTTAGTCCCAG ATCCACTACTTGATGCTTGGCGCTTGTCCATTGGCATTCGCCGTAGAAATGATGGAGAGGCAATTCATGGCAAAATCATTTAATTGCATTTTTAGACAAA GTTTAGTTATGTCTAATTGTCCACTCTCTGATATTTATACAATACTTGCATTGGTACATGTATTCTTGGAAGGAAAAATGGATGATGTGCAAATAATTCA GCAACAAAAAATAAATAATACACCCAAGGTTGCTTTGGTGGATTCAAATTTCTCTAAAGTCCTGCTTCATGGGAC
• Tissue: pods
• Gene name: LI_gene_159487;
• Additional information: details;

Expression of Ll_transcript_302133

FPKM

• PAB: 0.4
• PNAB: 2.3
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.9
• PW2: 0.5
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_302133

• Blastp: Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 from Arabidopsis with 56.91% of identity
• Blastx: Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 from Arabidopsis with 56.91% of identity
• Eggnog: Dehydrogenase(COG0300)
• Kegg: Link to kegg annotations (AT1G24470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463833.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;