Id Trinity | TRINITY_DN48259_c3_g1_i4 |
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Name Transcript | Ll_transcript_302497 |
Sequence | ATTTACTAGATACAAGTTACAACTTTGAGCTGATACAAGGTTGTTGTAGCTTAACCAAAGTTATCACATTTAAGTCTTTATGATCTTCCATGTATTGAGT AGTTTGTAATATGTAACAAAAAATTGATGGTAGAATCGTGCGTTAGTTAGTTTGGAACAGTGTGGAGGAGACCGTTAGAAGTACCGGTAGTAGAGTAAAT CAAATGAGGGTTAGTCTAATTTCTAGAGGAATATGGAGGCCAAGAAAACCATATGCATAATGATTTAGAAAGATATAGAGATTAATGTGTTGTCAGTGAA CATGTTTTGTGATAGAGGATTGTGGCGTTCGGTCCATGTAGCCGACTCCGTTCAGTGAGATTAAGGCATGATTGTTGTTGTATATATAACGAAAAACTAT GGGCAGGTGTTTTTTTCTTCCAAGTACATGGGGTGTAGGCCTTGTTTATTCTTCAGTTTGTTAGTGCTGATATATTTGCTAGCATTGGATTTGTGAAGCT TGTAGTCATTGTAAATTCAGATAACTTTTTTATTATATATGTATACTGATTTGGGTAATCTGGTTTGTAGGACTTCAATTTCGGAGAGTTAATGTCATGT CTGAATCAGAGGGTCAGCCTCCTACTGCCTTTGTTACTGATGTTCTATTGTGGAAGCGATGGCATGTTTCCTTGGGTACCATTGTCGTGGCAACCGTAGC CTGGTTCCTACTCGAGTGGACGGATTTACCATTTTTAACAATTTGTTCAGATGTGTTGCTGATTTTGATCGTAGTGTTGTTTCTGCATGCTAACTATGCC GCCTTTAGAAATAAACAACCACCAACATTACCTGAGCTAGTAGTGACAGAGGAGCTGGTTAATAATATAGCAGCTTCATTTCGGGTCAAAATCAATAATG CTCTCCTTATAGCCCATGACATAACTATCGGCAAGGACTTCAGAATTTTTTTCAAGGTGGTGGTTTGTCTGTGGCTCTTGTCCGTCATCGGCAGTGTTTT CTCGTTCTTCACACTTGCATATATCGGTATGCTTGCATCATTACTCTATTTTTTTAAGGCATTTTACGAAACCTCTAATTGAGACCCTCCTCTCTTGTTA TTATAAATTCTGCAACTACTATTAAGTCATTTTTAGGTGTTGCACTTTAACCTTTTAGCTCTCCCTCCTTTCTTCTATTCTTTGTTTTTCGGTGGGTGGT GATGATGGTCATTTCTGTCCAACTTTGCGCATAGGAATCCTTCTAAAACTTTCATTTCATTCACCAAATGGTTTCTGCTTAATTGATTTGATAGTTGCAC ACGATTGCGGGAAAATGCGGCTACAATTGTGGTTGCGAAGCCGTTGTGGAGACTCCGAAAACTGCAATATTGCAGCTGCAATATGCGGTTGCAGAGTGGA ATTTAAAACACCGGTTCCGTGTAATGTCACCAATCCTAATTGATATCTTAATCTACCATGTTTGGTTCTGTGCAGTCATTTTATAGCAGCTAGTTTTCTT GATCTTCATATGTAAATCTTATAAGTCTCAACTTAAGTTAAGGATATTTATACAAAATTAGAAACTTCTCAAACTTTGTAAATAACTTATTTACAATTTT CTTCTTTAATTGTGACAGGAACACTCATGTTGATTACTATCCCTGCATTGTACAGAAAATATGGAAAATATGTAGATAAATGTTGTGGCATTATACAAGA CCAATTTTCAAAACATTACAGAATAGTAGATGAGAATGTTTTCAACACATTGCCCCGTAATGTTTCCAAGGATAAAGAGTCTTAGTTTTCAAGGTCTTGA AGCATTTTATGTTAGTGTAAATTAACTATTTCATCTTACTTTTGTGTTGTTTCAAATCTTGCCACAACTTGGCCTCATATGTGGGGACAATATTGTGAAA TTTATGCAAGTTGTTCTGATGACAATCAGCAAAAGTGATTATTGGAATACTTTGTAATTAGTGGGTTTGAAGTTAGCTTGGCGTAATGGTAAGGTTGTTG CTTAGTGATTATGAGGTTACAAGTTCAAATCTTGAAAACAATCTCTTTGTTTGTTTTTTCGCATATACCACTAAGTGAGAGACTTGTACATTGGGTCGCC TATTGTAGTCGGTGGGTTTTTGTTTTTTAATGTGTTGCTTTTAACTTTGAATTGTTGGAAAATAAATCTCACATTGCCTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_159509; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302497
Blastp | Reticulon-like protein B16 from Arabidopsis with 59.26% of identity |
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Blastx | Reticulon-like protein B16 from Arabidopsis with 59.26% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT3G10915) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442674.1) |
Pfam | Reticulon (PF02453.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |