Id Trinity | TRINITY_DN48261_c0_g1_i24 |
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Name Transcript | Ll_transcript_302019 |
Sequence | GTTTGTTTAGTGTAACAAAAGAAACGTTTCGAAACCATTCCTCTTACTCGATTCTTGTCTTCATTGAATCCACCATGGAAATGGACGCCGCCAAACAAGA ATTTCTCAATGAATTTGGTGAACATTACGGTTATCCCAACGCTCCTAAATCCATTGATCAAATTCGAGCTACTGAATTCACCAGATTACAAGGTCTTGTA TACTTGGATCATGCCGGTGCTACTTTATACTCTGAGCTGCAAATGCAATCAGTTTTCAGTGATCTTACTAGTAATGTGTACGGAAATCCTCATAGCCAAA GTGAATCCAGTTCTGCTACACTTGACATTCTGAGTGATGCTCGCCAGCAGGTCCTTGACTACTGCAATGCATCTGCAAAAGACTATAAATGTATATTTAC CTCTGGGGCAACAGCAGCATTGAAGCTGATTGGAGAGGCTTTTCCATGGAGTTGTAACAGTAATTTTATGTATACAATGGAGAATCATAACAGTGTTATT GGAATCAGAGAATATGCTCTTGGCCAAGGAGCTACAGCCATTGCAGTAGATATTGAAGATGTACATCCTGTAACATCTGGAGAAACAATTTCTATGAAGA TATCACAACACGGAGTACAAAGGAGAAAAGTAGCTGGGTTGACCGAAGGAGAGCCAACAGGTGACACATATAATTTGTTTGCCTTTCCCTCTGAGTGCAA TTTCTCAGGGTTGAGGTTTGGCCTTGACTTGGTGAATATCATGAAGGAAAGTTCGAGAAGGATTTCAGGAATTTCTTCAGTTTGCAATAATGGACAATGG ATGGTTTTGATTGATGCTGCAAAGGGATGCGCGACTATGCCACCAGATTTATCCAAGTATCCTGCCGATTTTGTCACAATATCATTTTACAAGCTGTTTG GTTATCCAACTGGGCTTGGAGCACTCATAGTTCGAAATGATGCAGCCAAGTTACTGAAGAAGACTTATTTTAGTGGAGGTTTGCTGCCTAGTTTGTTACT TGCCTGTTTTTTGTTCATACACAGTTATATGGTAGGCTGGTCCCAATCACAGGCACGGTTGATGCATCAATTGCTGATATTGACTTCGTTAAAAGGAGGG AGCACATTGAACATATGTTTGAGGATGGCACTGCTTCGTTCTTGAGCATAATATCTATCCGTCACGGCTTCAAAATACTGAATTCTCTAACTGTGTCAGC AATATCACGACATACAAAATCTCTTACATTATATACAAGGAAAATGCTTTTGGCCCTGAGGCATGACAATGGATCTAGAGTGTGCGTTCTCTACAGACAT CATAACTCAATGGAATTGTGTCATGAAATGGGCCCAATAGTTTCATTCAACTTAAAAAGGCCAGATGGTTCCTGGTATGGATACCGTGAAGTGGAAAAGT TGGCATCACTTTCAAGAATTCAGCTAAGGACAGGATGCTTCTGCAATCCAGGTGCATGTGCAAAATACCTTGGCCTGTCTCACAATGATATTATTTCAAA TACTGAGTCTGGGCATGTTTGTTGGGATGATCATGATATAATGAATGGAAAACCTACTGGAGCTGTAAGAGTATCCTTTGGCTACATGTCTACATTTGAA GAGGCGAAGAAATTTGTTGATTTCGTAGCAAGTTCCTTCATATCATCTTCAAATCACATTGACCATGGGAATCATTTGAAAGGCATTGAGAAGGGTTTCC TGGATACTGGTTATCATCTTGAATCAATTACAATATACCCAATAAAATCTTGTGGTGGTTTCTGTGCAAGAAGTTGGCCTCTTAGCAACAATGGCCTGAA ACATGACCGTGAGTGGATTCTTAAAAGCCTAAGTGGTGAAACTATTACACAGAAAAAGGTTCCTGAAATGTGCTTTATAAGCACCTTTATTGACCTCAGT CAGGGAATGCTGTTTGTAGAGTCTCCACGTTGCAAAAAAAGATTACAAATCAGGCTTGAGTTAGATGCTAACGACGGTGATATAGAGGACATTGAGCTAT ATGGCCAGAGGTACAAGGTATATAGTTACAGCAATGAAACCAATGTATGGTTTAGTCAAGCCATCGGCAAACCTTGCACTTTTTTACGATATTCTAGTTG CGATCAGGACTTTTTGTTGAATAAGACCAATGGTGCAGCAGCGTGTAGAGGTGCAAAGAGCATGCTCAGTTTTGCTAATGAAGGACAGTTTTTACTTGTA TCTGAGGAAAGTGTATCTGACCTAAACAAAAGAATAAGTTCAGATGTACAAAAGGGAATACGTGGAACGGCAATGGAAGTCAATGCGAGTAGATTCCGTC CGAACCTTACTGTATCTGGAGGCAGGCCTTATGAAGAAGATGGATGGAGAGACATTAGAATCGGAAATACATATTTTAGATCTATAGGCGGATGCAATCG GTGCCAGATGATCAACATTGAACAAAATGATGGACAAGTGCAGAAATCAAAAGAACCTTTGGCAACTTTAGCATCATACAGGAGAGTACAGGGTAAGATT TTGTTTGGCATACTACTAAAGTATGCTTCTGATGATGGAGAGTGGGAACAAGTTGATTCCTGGCTTCATGTAGGACAGGTTGTATATCCCAATTCCCTCT AGTTTATTTAGTCTATAGTGCATAACAGGAAGCAGATTTTGAAGACCACAGAACAATCAATAAATTAAAATTAGCATTATATACATACAACAGAAATGTC CCCAAATTAATGTCCTCAAACTCTATAGGGGAAAGCCTCTGGTTTAGAGTGTATTGCTTCTATGCTCAAAATGTATGTTGGGTATGATTTTTTTTAATGT TGTATACTACAGAAAAATCAATAATAAAGAGGATAGATATATAATGCATTTATTTG BLAST |
Tissue | pods |
Gene name | LI_gene_159518; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_302019
Blastp | Molybdenum cofactor sulfurase from Arabidopsis with 66.67% of identity |
---|---|
Blastx | Molybdenum cofactor sulfurase from Lycopersicon with 58.27% of identity |
Eggnog | cysteine desulfurase(COG0520) |
Kegg | Link to kegg annotations (AT1G16540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413647.1) |
Pfam | Aminotransferase class-V (PF00266.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |