Ll_transcript_304261

• Id Trinity: TRINITY_DN48263_c1_g1_i1
• Name Transcript: Ll_transcript_304261
• Sequence: AAACAAGTTGCTAAATGTGACTTTCATTTTTGTTGTCTTTTCATTATACAATTATAGCTTCCATTATCCATCTATTTTGTATTTATTTCTTTTCCTTATA TCTCTCATGGTCCATGTATTAATAATTATGTGTCCATATATGCAACCAATAGTATTCAAACTCATAATCTTTTTGTTATTAAACAATAATCTTATCATTA TGCGGAGCTTTGATTGAATTAAAAAAATTGGGAAGCTTGTTTGTTTTATTCCTTTTGAGAATCCAATTCACATATATGTTATCTCTTTGTTTGATTAACC CTTTTATGTTCCTAAGTCAAAGCCTTGAGTTTGTGGTGATTAGAGACTGTGTAATAAGTTCTGATTCTTATGTGAGTGGCTTTGCAGGTTTGGGTTTTAG CATCTTAGAAAGTGCTTAAGCAATTGTGGAAACAATTAGTGTTCATGGATTGGGATTGGAAAGAGTTTGCTTGGGATTCATCTAGGTTGGAGGTTGATAA GTGTGTCTTTGAATTGAGAGATATTAAGAAGAAGAAGGGTGAAGGTGATTCATTTGATTTGAGTCTTGGTGAAGCTTCTAATTTGATGGAAAACCCAGCT CCTGATACTCCTCAGGAACTGAAAGGTTCAAAGGCAGTGCTATCAGCTCCCGGGTTATCGAAGAAATCGCGGTCGAATAATGGATTGCAGACTTTGTTTT GCTTGGTTGATGGATGCAAGTCTGACCTCAGTGATTGCAGAGAGTATCATAAGCGACATAGGGTCTGCGAAAAACACTCGAAAACCCCTGTTGTATTGGT AAGGGGTAAAGAGCAGAGGTTTTGCCAGCAATGCAGCAGGTTTCATTCAGTTGGGGAGTTTGATGATGTCAAGAGGAGTTGCCGGAAACGTCTTGATGGT CATAATAGGCGCAGGAGGAAGCCTCAGCCGTCGCCTTTTTTCATGGCTTCTGAGAAATTCCTGTACAATTACAAAGGACCAAGGATCCTGCAATTTGATA GTCCTCAGACATATTCTAACCCTATTATGAGAAATATGTGGCCTACCACAGCCAAAATTGAAGCTGAATCTGATTACGATCGTCGCCGACTTTTATATAG AGATGACAATCATAAGCAGCAGAGTGAACTTCTTCTCTGGCAAGAAAGTGGCCTTAAAGCAAGCAATGGTAATGAAGCAATGCTTGGAACTCCAATCTAC CAGCAAACTTGTGGTGCAATTGCAGCACCAGAAAGTCGAAAAGGTAGCCGAAAACCATATTCTGATAGCAAACTTGGATCTTTTGACTCAAGTTGTGCTC TCTATCTTCTGTCAACACTTCAAACACAAAGCTCAGAGTTGAGTTCAGTGCAATCTAGCATCACCTGCCCAATACAATCTCCATCAGGATCTGTGAATTT GGATGCTGTGGATGAGTACTCATGCACAGAAAGGGTGATGGATAACCCTACTAGCCCAGTATTTGTCCGTGACGCCGTCGCAGCCGATATTCGATGCAGT GGGATGCTGCAAATTGGACATGATGGATTGGTGAAAAATGAGGACTCAATGATGTTTCCTTCCTTTTGGGAGTAAGTAGCTAAGTTGTGCATTTTCTTGG GAATTTCATGAAATTTTTGGCATTGACTTGTGTTGTTCAATAATAAAGCTAAACTTGTTGAAGCTTAAAATAAGGATCATAAGATTTACACAATGCAAGT TGGATTGTTGTTGAAGCTAAAATGAATTTCTTGGCATCAACAATGTTCTTTCAATTTTTTTTATCAAAAATCTATGTTCTTGAACTATTCAGAAGTTTAT TTTTCTTTTATGAAGGATTTTTAGTTTTATTGTAATTTTTTTTCTATGACACTCCCACCTGATTGCATAGTACTTTGATTGCCGTTGTTATAAGACAAAA ATCGTTTA
• Tissue: pods
• Gene name: LI_gene_159544;
• Additional information: details;

Expression of Ll_transcript_304261

FPKM

• PAB: 4.7
• PNAB: 3.6
• PS1: 1.9
• PS2: 0.2
• PS3: 0.6
• PW1: 5.3
• PW2: 8.8
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304261

• Blastp: Squamosa promoter-binding-like protein 13B from Arabidopsis with 47.78% of identity
• Blastx: Squamosa promoter-binding-like protein 13B from Arabidopsis with 52.2% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG410YD0Z)
• Kegg: Link to kegg annotations (AT5G50570)
• CantataDB: -
• Mirbase: gma-MIR156c (MI0001772)
• Ncbi protein: Link to NCBI protein (XP_019429681.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;