Id Trinity | TRINITY_DN48263_c2_g2_i1 |
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Name Transcript | Ll_transcript_304269 |
Sequence | TGGAATTATCTGACAGCACTATCACTTTCATCACACCATTCACTCAAACTAACTTCCCACTTCACTGCAAGAATTGGCATTTATACTTGCCTTCCTTTAC TAGCTTATTATTAAAGACACAACTCATCTCTAACAGACTCCTCCATGCACTATTCCCCTACCCTATTGTAACTAACAAAAGGACACAATTAACAACATGG AACTTGTGGTCCACACCCTTTGCACCTTCTTTTCTGTCTTCCTGCTTCATATAAACTCACCCTTTCACTTCATTGCTCCTCAAACTCTAGCTTCTACCAC TTCATTGCACCTTCTTGTCACTTCTCAATTCTCACAATGGAGGCTAGGAGTAATGAGAGGAAGAGAACATTGGTTGAGAATGTAAGAAAGGGTAGCACAG TTGAAGAAGTGGAAAATGAAGTAGAGGAGGAGTATGAAAGTGTTAGTGTTGAACATCTTACAGAAGAGAACATTGGTTGAGAATGTAAGAAAGGGTAGCA CAGTTGAAGAAGTGGAAAATGAAGTAGAGGAGGAGTATGAAAGTGTTAGTGTTGAACATCTTACAGAAGAAGAAAAGAAGAAAGGGGTTGGTGGGAGAAA AGGTTCATCAAGTGGAGGTGTTTCTCCACCTTCCTGCCAGGCAGAGAAGTGTGGAGCTGATATGACTAATGCAAAGAAATATCATCGCCGCCATAAGGTG TGTGAGTTTCATTCTAAGGCACCTGTTGTGGTGGTTGCAGGCCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCACGACCTGGCTGAGTTTGATG AAGCTAAAAGAAGCTGCCGCAGACGCTTGGCTGGGCATAACGAACGGCGCCGGAAAAGCAACTCAGAGAGCTGCAGACACAGCAAAGGTCATCACCCTAA GGAAAGCCAGTGCAGGCTTGCTGATGAGAGGGGTCATATTCAAATCAATATGGCAGGGAATTCTGGCTACAAATCTTTTCATATCAAATGAAGCTATCTG ATGTTCAGTTGTCTCCCTCTCTTCTGTCAATCTTTAGTATCTTACATGCCAAGGCATATAATAAAGACCCCTTTGTATGTTTACCACAGCAAAACTTCCA ACAACCAAAGGTGATGCTGTCTTTTGCGATCTAAACTAGTATGCTTGGAACTTTATGTCTTACTTATTTAGTGAGTGTCTCGTGTGTTCGGTTTGCCCTA TCATTATTATCTTATTAAAGCAACTTGAACACTGTGCCCTCATCTTAACATAAATTGAATAAAATATCTCGTAATATAAGAAGATAAATTATTTTCTT BLAST |
Tissue | pods |
Gene name | LI_gene_159549; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304269
Blastp | Squamosa promoter-binding protein 1 from Antirrhinum with 65.09% of identity |
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Blastx | Squamosa promoter-binding protein 1 from Antirrhinum with 80% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450579.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |