| Id Trinity | TRINITY_DN48263_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_304278 |
| Sequence | TGGAATTATCTGACAGCACTATCACTTTCATCACACCATTCACTCAAACTAACTTCCCACTTCACTGCAAGAATTGGCATTTATACTTGCCTTCCTTTAC TAGCTTATTATTAAAGACACAACTCATCTCTAACAGACTCCTCCATGCACTATTCCCCTACCCTATTGTAACTAACAAAAGGACACAATTAACAACATGG AACTTGTGGTCCACACCCTTTGCACCTTCTTTTCTGTCTTCCTGCTTCATATAAACTCACCCTTTCACTTCATTGCTCCTCAAACTCTAGCTTCTACCAC TTCATTGCACCTTCTTGTCACTTCTCAATTCTCACAATGGAGGCTAGGAGTAATGAGAGGAAGAGAACATTGGTTGAGAATGTAAGAAAGGGTAGCACAG TTGAAGAAGTGGAAAATGAAGTAGAGGAGGAGTATGAAAGTGTTAGTGTTGAACATCTTACAGAAGAGAACATTGGTTGAGAATGTAAGAAAGGGTAGCA CAGTTGAAGAAGTGGAAAATGAAGTAGAGGAGGAGTATGAAAGTGTTAGTGTTGAACATCTTACAGAAGAAGAAAAGAAGAAAGGGGTTGGTGGGAGAAA AGGTTCATCAAGTGGAGGTGTTTCTCCACCTTCCTGCCAGGCAGAGAAGTGTGGAGCTGATATGACTAATGCAAAGAAATATCATCGCCGCCATAAGGTG TGTGAGTTTCATTCTAAGGCACCTGTTGTGGTGGTTGCAGGCCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCTGAGTTTGATG AAGCTAAGAGAAGCTGTCGCAGACGCTTGGCCGGACATAACGAACGACGTCGAAAAAGCAACCCTGAACCATGTAATGAGGGCTGCAGGCACAGCAAAGG CCATCATCCTAAGGAAAGCCAGTGCAGGCATGGTGATGAGAGGGGTCTAATTCAGATGAATATGGTGGCAGGGACTTCTGGTTACAAACCTTTTCATATC AGATGAAGCCACAGTGTTCACTTGGCTCCCTCTCTTCTGTCACCCTATGGTACCTTGCATGCCAAGGCATATAATAAAAACCAAACCCCTTTGTGTATGT TTCCCACAACAAGAATCTGACTCACAAAAAATACCAAAGGTGGTGTCTTTTGAGAGCCAAACTAGTTTCCTTGGAACTTTATGTTTACTTATTTAGTGAG TGCCTCTTGTGTTTTCTGTTTGCCTTATCATTGGTATCCTATTAAAGCACACTTCAATACTGTGCCCTCATCTTCTACTTGATTAGTTTAAAAATGCTAT TGCTTCTTTTGGGTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_159549; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304278
| Blastp | Squamosa promoter-binding protein 1 from Antirrhinum with 66.99% of identity |
|---|---|
| Blastx | Squamosa promoter-binding protein 1 from Antirrhinum with 83.12% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451384.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |