Id Trinity | TRINITY_DN48272_c2_g4_i11 |
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Name Transcript | Ll_transcript_303863 |
Sequence | TGAAAGGGGTTAACATGTGACACCTGCCTTCTCTTAGAATGTCTTACCCTGTTTTTTCGAAAAGTTTATCTTTATATAACTTGCATGCCCAAACCAATTA CAATTGGTTCATAAACCCCTCAACTTCCAAAGCCAACATAACTAGATCATATATATATCTCAATAATCAACCTAATTCGATTATAGAGACATTGGTACAA AGTGACTTGAGGTTTGAGTTTGGAATCTCAACATCAACATAACGGGGACCTTTGTGTTTCATCATTGTAAGTGCATAATCGAGCGACAAAAAAAAATCAC AAGCGTATTCACACAAAGATCCTTTCATGTTATCGACAAATGCATAATTTAAGGTTGTTTTATGTTGTGTTGGCTTAGTTATAACAGAATTCAAATTGTT CAAAGGGGAGAAAGAGAAAAACACACGACACATGAGAAATTCACCCAATGAACGCACGTTCTTCTGGACTCAAGCAAACGCTCTACTTAGGAAGAATTTA ACTTACCAGAAACGAAATGTAAAGACCAACGTTCGGCTCATATTGTTCCCCTTTGTACTGTGTTTGTTAATGCTTCTCCTCCAAAAGTTGATTGAAAAGC AAATATTGGATAAGCCTGAAAACAAGTGTGGATGTATTTGTACCAAGACACAAGGGGATAAGTGCCTTGAGAAGGAGTGTGGAATTCAGTATTCAGATTT GAGTCAAGTTGGCACCTGTCCTATTCCACATCCTCCAGAATGGCCTCCTTTGATGCAAGTGCCGGTTCCACAATATCGAGCTGTGAAATCGATTTTTCTT CCGTTTTTGGATTTACCAGATGAGTCCTGCAGGAAGAATGGCTCATGTCCTATCTCTATGTTCTTCACCGGCAATAATATGTCTTTTGGAGAAATTATGT ATGAGAATATGCTCCCAAGCACCTTGACTATAAATATCTCTGATATTACGGGTAGCATGGCATTAAATGTCCTGGGATCAGCAACAAAGACAGGATACTC CAATTTTTTCGAACCTTCTTTCTTTTCAGATCTTCCTATTTATCTTCTACAAAGTCAATGCAGACAGAACTCTACATTCTCCGTTTCTGTCCAGTTAGCA TCCATTAGTATGCAGAAAGAGGTAAAATGTGCTCAGGTGTTACATTTATGGCGTAATAGTTCATGGGAGGTGAATGATGAGCTATATAAAGGTTATTATA AATCCAACACAGGGAGACAGATCAACGAGATATCTGCTGGTTATGATTTTCTAAATTCAAATGGGAATAAATTTAATGTCAGCATATGGTACAACGCAAC CTACAAAAATAGTACTGGCTCTCGTCCTATTGGATTGGCTCGGATTCCTCGTTCTATAAATATGGTATCTAATGCCTACATTCAGTTCCTACTGGGACCT GGTAACGAAATGTTGTTTGAGTTTGTAAAGGAAATGCCAAAACTTGAGACTCCAAATAAGTTTGATTTGGCTTCTCTCTTAGGTCCTCTCTTCTTCACAT GGGTCATCCTGCAACTTTTCCCTGTTGCATTAATATCACTGGTATATGAGAAGCAACAAAAATTAAGAACCATGATGAAAATGCATGGTCTTGGTGATGG GCCATATTGGTTGATTTCATATGGTTACTTTCTTGCATTATCTGTAGTCTACATGCTGTGTTTTGTGATGTTTGGCTCAGTCATAGGGTTAAAATTCTTC ACAATGAATGACTACACCATCCAATTAGTGTTTTATTTCATCTATATAAATTTACAAATTTCATGGGCATTTCTATTGTCTTCCATTTTTTCAAATGTTA AGACTGCTACAGTAACTGCATATATAGGCTTGTTTGGAAGTGGGTTGTTGGCCGGCTTTCTTTTCCAAATTTTTGTTCAAGATACATCATTTCCGAGAGG GTGGATCATGGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCGCAGTCTTCTTTTACTGGGGATACTTCGGGGACTCAT GGTATGCGGTGGGGAGATCTTAGTGATAGCACAAATGGTATGGAAGAGGTCTTAATTATCATGTTTGTTGAGTGGGTGTTGGCACTTTTTGTTGCTTATT ACATTGATCAGCTTTTTTCATCTGCAAGTCGGAAAAGCGCTCTGTTTTTCTTGAAAACATTTCAGAAAAAGCCTTGTCCATCCTTTAGGAAGCCAAGTAT CCAAAGTCAGGGACATAAGGATTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGGTGAGTTTTGCATTTAATGAATGATTTTTGTCTTTTATGTTT TCATCAACAGTTTTCAAATTTTAATAATCTAATTTCAACCACCAGGTGTGTTTTACCTTGTAGTTTCGTAAATTTATGTGATAATGCTGCATGGATGATG AGTGACAGTATAATACACAGTAGCTAGGTGAAATTTTAATTGGGCAAGGAGTTTGTTAGCAAAACAAATAACTTCCTTTAGGCACAATCTTTTATTTTTA CACTATATATATTGTTTATAGGGAAAATATAAGATTAGGGAAAACTGAAAGTTAAATCCATGTATTATTTATGACATTGTTTATCACAAAGCAACTTTTT TGTGTTAACATATGTCGTACTTACTCGATG BLAST |
Tissue | pods |
Gene name | LI_gene_159634; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303863
Blastp | ABC transporter A family member 7 from Arabidopsis with 55% of identity |
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Blastx | ABC transporter A family member 7 from Arabidopsis with 55% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT3G47780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429341.1) |
Pfam | ABC-2 family transporter protein (PF12698.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |