Ll_transcript_303831

• Id Trinity: TRINITY_DN48272_c2_g4_i2
• Name Transcript: Ll_transcript_303831
• Sequence: TGAAAGGGGTTAACATGTGACACCTGCCTTCTCTTAGAATGTCTTACCCTGTTTTTTCGAAAAGTTTATCTTTATATAACTTGCATGCCCAAACCAATTA CAATTGGTTCATAAACCCCTCAACTTCCAAAGCCAACATAACTAGATCATATATATATCTCAATAATCAACCTAATTCGATTATAGAGACATTGGTACAA AGTGACTTGAGGTTTGAGTTTGGAATCTCAACATCAACATAACGGGGACCTTTGTGTTTCATCATTGTAAGTGCATAATCGAGCGACAAAAAAAAATCAC AAGCGTATTCACACAAAGATCCTTTCATGTTATCGACAAATGCATAATTTAAGGTTGTTTTATGTTGTGTTGGCTTAGTTATAACAGAATTCAAATTGTT CAAAGGGGAGAAAGAGAAAAACACACGACACATGAGAAATTCACCCAATGAACGCACGTTCTTCTGGACTCAAGCAAACGCTCTACTTAGGAAGAATTTA ACTTACCAGAAACGAAATGTAAAGACCAACGTTCGGCTCATATTGTTCCCCTTTGTACTGTGTTTGTTAATGCTTCTCCTCCAAAAGTTGATTGAAAAGC AAATATTGGATAAGCCTGAAAACAAGTGTGGATGTATTTGTACCAAGACACAAGGGGATAAGTGCCTTGAGAAGGAGTGTGGAATTCAGTATTCAGATTT GAGTCAAGTTGGCACCTGTCCTATTCCACATCCTCCAGAATGGCCTCCTTTGATGCAAGTGCCGGTTCCACAATATCGAGCTGTGAAATCGATTTTTCTT CCGTTTTTGGATTTACCAGATGAGTCCTGCAGGAAGAATGGCTCATGTCCTATCTCTATGTTCTTCACCGGCAATAATATGTCTTTTGGAGAAATTATGT ATGAGAATATGCTCCCAAGCACCTTGACTATAAATATCTCTGATATTACGGGTAGCATGGCATTAAATGTCCTGGGATCAGCAACAAAGACAGGATACTC CAATTTTTTCGAACCTTCTTTCTTTTCAGATCTTCCTATTTATCTTCTACAAAGTCAATGCAGACAGAACTCTACATTCTCCGTTTCTGTCCAGTTAGCA TCCATTAGTATGCAGAAAGAGGTAAAATGTGCTCAGGTGTTACATTTATGGCGTAATAGTTCATGGGAGGTGAATGATGAGCTATATAAAGGTTATTATA AATCCAACACAGGGAGACAGATCAACGAGATATCTGCTGGTTATGATTTTCTAAATTCAAATGGGAATAAATTTAATGTCAGCATATGGTACAACGCAAC CTACAAAAATAGTACTGGCTCTCGTCCTATTGGATTGGCTCGGATTCCTCGTTCTATAAATATGGTATCTAATGCCTACATTCAGTTCCTACTGGGACCT GGTAACGAAATGTTGTTTGAGTTTGTAAAGGAAATGCCAAAACTTGAGACTCCAAATAAGTTTGATTTGGCTTCTCTCTTAGGTCCTCTCTTCTTCACAT GGGTCATCCTGCAACTTTTCCCTGTTGCATTAATATCACTGGTATATGAGAAGCAACAAAAATTAAGAACCATGATGAAAATGCATGGTCTTGGTGATGG GCCATATTGGTTGATTTCATATGGTTACTTTCTTGCATTATCTGTAGTCTACATGCTGTGTTTTGTGATGTTTGGCTCAGTCATAGGGTTAAAATTCTTC ACAATGAATGACTACACCATCCAATTAGTGTTTTATTTCATCTATATAAATTTACAAATTTCATGGGCATTTCTATTGTCTTCCATTTTTTCAAATGTTA AGACTGCTACAGTAACTGCATATATAGGCTTGTTTGGAAGTGGGTTGTTGGCCGGCTTTCTTTTCCAAATTTTTGTTCAAGATACATCATTTCCGAGAGG GTGGATCATGGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCGCAGTCTTCTTTTACTGGGGATACTTCGGGGACTCAT GGTATGCGGTGGGGAGATCTTAGTGATAGCACAAATGGTATGGAAGAGGTCTTAATTATCATGTTTGTTGAGTGGGTGTTGGCACTTTTTGTTGCTTATT ACATTGATCAGCTTTTTTCATCTGCAAGTCGGAAAAGCGCTCTGTTTTTCTTGAAAACATTTCAGAAAAAGCCTTGTCCATCCTTTAGGAAGCCAAGTAT CCAAAGTCAGGGACATAAGGATTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAGAAGGTGGAGCAGCTAATACTTGAACCAACTGTTAAT CATGCAATTGTATGCGACGACCTTAAAAAGGTCTATCCTGGGAGGGATGGTAACCCGGAGAAAATTGCTGTGAGTGGATTGTCCCTTGCTTTGCCTCAAG GTGAATGCGTTGGTATGCTTGGTCCCAATGGTGCTGGAAAGACGTCTTTCATCCATATGATGATCGGTCTCACGAAGCCAACCTCGGGTACTGCATTTGT TCATGGTCTGGACATAAGAACTCACATGGATGGAATATATACTAGCATGGGTGTTTGCCCACAACATGACTTGCTCTGGGAAACCCTGACAGGAAGAGAG CACCTACTCTTTTATGGCAGACTTAAGAATCTTAAAGGTTCAGCCTTAACACAAGCAGTGGAAGAATCTTTGAGATCTGTAAACCTTTTTCATGGAGGAG TTGCCGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTCAGTGTCGCAATTTCATTAATCGGGGATCCTAGAGTTGTTTATATGGATGA ACCAAGCACTGGATTAGATCCTGCATCAAGAAACCTCCTATGGAATGTTATTAAGCATGCAAAACAGGATCGTGCCATCATTCTCACCACACATTCCATG GAAGAGGCAGAAGTCCTATGTGATCGATTAGGAATTTTTGTTGGTGGTAGCTTGCAGTGCATAGGAAATCCAAATGAGTTGAAAGCCAGATATGGAGGAA CTTATGTGTTCACAATGACAGCATCTTTGGATCATGAAAAGGACGTAGAGAACTTGGTGCTGCAGTTATCCCCAAATGCTAAGAAGATATACCATATCTC CGGGACCCAGAAGTTCGAGCTCCCGAAAGATGAGGTTAGAATATCGAATGTATTCCAAGCCGTTAACGATGCGAAAAGAAATTTTACAGTTTCTGCTTGG GGTTTAGCTGACACCACATTGGAAGATGTCTTCATCAAGGTTGCGCGTAGTGCTCAGGAATTTGAAACATTGTCATAAATTTCATATACATTATATTGCT GTTTACTGAGTAATTTTGGGGTAGACAATCCTTACTATATGATAGGGAACAATTCCCACAACCAAGGAATTAAACTAAATTTATTCTACTCCTAAGGAAA CAAATGATACTAAAAGATAAAATTCATATTTCATTGATTGATTCTCATTATAG
• Tissue: pods
• Gene name: LI_gene_159634;
• Additional information: details;

Expression of Ll_transcript_303831

FPKM

• PAB: 0.6
• PNAB: 2.4
• PS1: 1.8
• PS2: 1
• PS3: 1.6
• PW1: 1.6
• PW2: 2
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_303831

• Blastp: ABC transporter A family member 7 from Arabidopsis with 64% of identity
• Blastx: ABC transporter A family member 7 from Arabidopsis with 64% of identity
• Eggnog: (ABC) transporter(COG1131)
• Kegg: Link to kegg annotations (AT3G47780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429341.1)
• Pfam: ABC-2 family transporter protein (PF12698.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;