| Id Trinity | TRINITY_DN48272_c2_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_303833 |
| Sequence | GTAAAGACCAACGTTCGGCTCAGATTGTTCCCCTTTGTACTGTGTTTGTTAATGCTTCTCCTCCAAAAGTTGATTGAAAAGCAAATATTGGATAAGCCTG AAAACAAGTGTGGATGTATTTGTACCAAGACACAAGGGGATAAGTGCCTTGAGAAGGAGTGTGGAATTCAGTATTCAGATTTGAGTCAAGTTGGCACCTG TCCTATTCCACATCCTCCAGAATGGCCTCCTTTGATGCAAGTGCCGGTTCCACAATATCGAGCTGTGAAATCGATTTTTCTTCCGTTTTTGGATTTACCA GATGAGTCCTGCAGGAAGAATGGCTCATGTCCTATCTCTATGTTCTTCACCGGCAATAATATGTCTTTTGGAGAAATTATGTATGAGAATATGCTCCCAA GCACCTTGACTATAAATATCTCTGATATTACGGGTAGCATGGCATTAAATGTCCTGGGATCAGCAACAAAGACAGGATACTCCAATTTTTTCGAACCTTC TTTCTTTTCAGATCTTCCTATTTATCTTCTACAAAGTCAATGCAGACAGAACTCTACATTCTCCGTTTCTGTCCAGTTAGCATCCATTAGTATGCAGAAA GAGGTAAAATGTGCTCAGGTGTTACATTTATGGCGTAATAGTTCATGGGAGGTGAATGATGAGCTATATAAAGGTTATTATAAATCCAACACAGGGAGAC AGATCAACGAGATATCTGCTGGTTATGATTTTCTAAATTCAAATGGGAATAAATTTAATGTCAGCATATGGTACAACGCAACCTACAAAAATAGTACTGG CTCTCGTCCTATTGGATTGGCTCGGATTCCTCGTTCTATAAATATGGTTGCATTAATATCACTGGTATATGAGAAGCAACAAAAATTAAGAACCATGATG AAAATGCATGGTCTTGGTGATGGGCCATATTGGTTGATTTCATATGGTTACTTTCTTGCATTATCTGTAGTCTACATGCTGTGTTTTGTGATGTTTGGCT CAGTCATAGGGTTAAAATTCTTCACAATGAATGACTACACCATCCAATTAGTGTTTTATTTCATCTATATAAATTTACAAATTTCATGGGCATTTCTATT GTCTTCCATTTTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATAGGCTTGTTTGGAAGTGGGTTGTTGGCCGGCTTTCTTTTCCAAATTTTTGTT CAAGATACATCATTTCCGAGAGGGTGGATCATGGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCGCAGTCTTCTTTTA CTGGGGATACTTCGGGGACTCATGGTATGCGGTGGGGAGATCTTAGTGATAGCACAAATGGTATGGAAGAGGTCTTAATTATCATGTTTGTTGAGTGGGT GTTGGCACTTTTTGTTGCTTATTACATTGATCAGCTTTTTTCATCTGCAAGTCGGAAAAGCGCTCTGTTTTTCTTGAAAACATTTCAGAAAAAGCCTTGT CCATCCTTTAGGAAGCCAAGTATCCAAAGTCAGGGACATAAGGATTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAGAAGGTGGAGCAGC TAATACTTGAACCAACTGTTAATCATGCAATTGTATGCGACGACCTTAAAAAGGTCTATCCTGGGAGGGATGGTAACCCGGAGAAAATTGCTGTGAGTGG ATTGTCCCTTGCTTTGCCTCAAGGTGAATGCGTTGGTATGCTTGGTCCCAATGGTGCTGGAAAGACGTCTTTCATCCATATGATGATCGGTCTCACGAAG CCAACCTCGGGTACTGCATTTGTTCATGGTCTGGACATAAGAACTCACATGGATGGAATATATACTAGCATGGGTGTTTGCCCACAACATGACTTGCTCT GGGAAACCCTGACAGGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAGAATCTTAAAGGTTCAGCCTTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_159634; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303833
| Blastp | ABC transporter A family member 7 from Arabidopsis with 52.89% of identity |
|---|---|
| Blastx | ABC transporter A family member 7 from Arabidopsis with 53.45% of identity |
| Eggnog | (ABC) transporter(COG1131) |
| Kegg | Link to kegg annotations (AT3G47780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429341.1) |
| Pfam | ABC-2 family transporter protein (PF12698.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |