Ll_transcript_302640

• Id Trinity: TRINITY_DN48276_c5_g3_i3
• Name Transcript: Ll_transcript_302640
• Sequence: CCTAAATCTCCGAAGATTAAACAAATCATTGATAGGATTATAGGAATGGAAGAAGAAGAATTATGCATTGCGAAGTTATTTGGCGTTGTAAAAAATAAGA AGAAATCAAATGCGAAAAAGAAGAACAAACCCAAGGCTGAGAAAGCAGTTACAGAGACAGTGGAATTGAAAGAAGCAGAAGCAGAGGATTCAGCTAGAGC AGTTGAAAACAATGAAGATGATGATGCTGTTGGTGTTGGTGATGGTGATGGTGATGCTGGTTCCGGTGGAGTTAGGACTTCGCTATTTGATTATTCTGTT GATAATTACTTTCATTACATGGACACCATTGCGAGGCTATGCGGTGAAAACGAAGATGTGGATTTTGAGCAGAGTGAGATTCAGAGAATATCTTCTTCAG TCACATTCTTGAGGAAATGGAGAGATTTTAAATATCCATCAAGAAGCATCAGGTTTGGTTATGGTCTTGGGAGCTCTGAGCGAAAAGATGCCAACACCAT AAATTTGCCTCAGTTTTCTTCTGCCACTGTTCCTACGTTTGATATGCAAAAGGAGAATCGACTTGAGAATGCCAAATCTCAGGAGTCCAGAGACTTTGTG ATGTATGTTGGAGGTCCTGTATGGGCATTAGATTGGTGTCCTCAAATGCATGAAAAGCCTGATTGTTCAATTAAATGTGAGTTCATTGCTGTCGCTTCTC ATCCACCTGGCTCTTCTTATCACACCATGGGTGCCCCACTTACTGGAAGAGGTGTCATACAAATATGGTGCCTTCTTAATATCAGGGAACAAAATGAAGA TGTATTTCTTGTCACAGAGAAGAGGAGGAAAACAACTAAAAAAGGTGGAGGCACGGATGACAAATCAACACAAATAAAGAGGCCTAGAGGAAGACCTAGA AAGAATCCAATACAAGTACCGGTTGATGATATGAATTGTGAGACCCAAAATGTGCTACCACTTGATATTAAATTTCCAGAAGATTCTGCTGAGCTTCCTA CTCCCGATGGAAATCTTGAACACGATGAAAAAGTATGTTCTCCCACAGAGAAGAGGGAAAAGCCCCCTAAAAAAGGTGGAGGCAAAAATGACAAATCAAT ACAAATAAAGAAGCCTAGAGGAAGACCTAGAAAGAATCCAATAGAAGTACCAGTGGATGATATGAATTGCGAGACACAAAATGTGCTACCTCTTGAGGTT AAGTTTCCAGAAGATTCTGCTGAGTTTCCTACTCCAGATGGGAATCTCGAACACAATGTAGAAGTATGTTCGCTCGCAGAGAAGAGGAAAAAAGGATGTG AAAAAGGTGGAGTCGCAAATAACAAGTCAACACAAATAAACAAGCCTAGACTAAGGCCTAGAAAGAGTCCAGTAAAAGTACCCGTGGATGATATAAATTG TGAGACCGAGGATGTGCTAGATCTTGATGTTCAATTTCCAGAAGACTCTGCTGAGTTTTATACTACAGATGGGGATTCAGAAACAAGTGAGGAAATATTT TATTCTACTACACACAAGAGAAAAAAAGGGCCTAAAAAAAATGAAGCCACAAGTGAAAAGTCAGGGCAAATAAAGAGGCTTAAGGGAAGATCTAAAGAGA ATTCAAACGAAGTAATAGCAGTTGATACAAAATGTGAGAACCAATCTGTGCAAGCTCTTGCTGTTCAAGTCCTAGAAGATTCAGCTGAATTTATATCTCC AGATTTAGCTAATGGCTACTGCAATAAGTATGCTTCGCTACAAAATTCTGTTGCAGAGGAAAAGCATGCCAAGACAGCTGCAACTGTATCAGAAACTCCT ATTAAAAGCAGGTTGAAAATGAATTTTAGGAAACAGGGTCAAATCCAAGATATAGGTCAGCCATTAGTGAATGAGGCAAATCATCAACCTCATTGTAGCT CTGAATTGAGTCCTCTAGCAGGTTCTCATTCTATTCCAGCCGAAGTAACTTTGCCAAGAGTTGTGTCATGCCTAGCTCATAATGGAAAGGTCGCGTGGGA TGTGAAATGGCGACCTCCTAATATGTCTGATTCCTTATTTAAGTACCGAATGGGCTATCTTGCTGTCTTGTTGGGCAATGGGTCTCTGGAAGTCTGGGAG GTTCCTCTTCCTCGTGTCTTGAGAGCAATTTATATACATGGAGAAGGCAATGATCCACGTTTTATAAAATTGCAGCCTGTATTTAAATGCTCCATATTGA AGCGTGGTGGCTTACAAAGCATACCACTGACAGTGGAGTGGTCGGTTACACCCCCTCATGATTATTTACTTGTTGGCTGCCATGATGGAACGGTTGCTTT GTGGAAATTCTCTAAGAATGCTTCTTCTAAATGTGATGATACAAAGCCTATACTTTGCTTCAGTGCGGATACAGTTCCTATTAGAGCAGTTGCATGGGCT CCATTTGATGGTGATCCAGAGAGCTCTAATATAATAGTAACTGCTGGACATGAACGCCTGAAGTTCTGGGACCTACGTAATCCATTTCGTCCTTTGAGGA ACCTCCATGCTGCACCAAGAATCATATACAGTCTGGATTGGCTTTCAAAACCAAGTTGCATCATTATGTCTTTTGAGGACGGAGCAATGAGAACCCTGAG CTTATCGCAGGCTGCAAATGACCTCCCTTTCAGTGGAAAAATATACAATGGAAAAAAACAACCAGGGTTGCACACTACTATTTATTCTTCTTTTGCCATA TGGAGCGTTCAAGTGTCACGTATAACAGGCATGGTTGCATATTGTGGTGCAGATGGTACTGTCTTCCGTTTTCAGCTTACAAGTAAAGCAGTGGAAAAAG ATAATTCTCCACGCAATCGAGCCCCATCCTTCCTCTGTGGGTCAGTGACTGAGGAAGAATCAACTCTGATCATCAGTACTCCAGTATCACATGCTCCTTT CCCGTTGAAGTCATGTGAAAGGGGTAGACGTCCTGCTGAATCTTTCCGAGAATTATTATCCAAAACAAATAATCAGAATGCAAAAGCTTCTAATTCTGAT TCTCAGACTTTAGCCATCTCTAATGGCGATGGTTTGGAATCTGAATCTGAAGAAGCATTGTCTTCCCGGGAGAAGCCCAAAAGACCAAAGTTGATTCATG GCAACAAGGAAAAACCGGTAGAAAACCAAGGTCTAATTTGCAGAGATGATGTGTCAACAAGTACTCCCGGGGTAGATAACGAAGAGTCAAATTTGAGCAA TATACCCGAAGTCTTTCCTTCAAAAATGGCAGCATTACATAAAGTGAGATGGAACATGAACAAGGGTAGTGAGAGATGGTTGTGCTCTGGGGGAGCTGGT GGAGTTGTACGTTGTCAGAAGATTGTTTTAACCGATATTGATAGGAAATGGGCCTTGAAGAGATGATAGAAATTTTAACTATGTAAGTTTGGTAATATCA GGTCTAAGAATCACATCACACTAATATATGTAACATATTTCTACTTCATTATTACAAAATGCAGCAGATCCTTTGAAATTTAAGTGGGTAGAGTTGAAAA GAAAGGGTCATGCCTTGTTGGTAGTTGAAAATCCATCTGCATAAATATATTTAACTTTTTGTTTCTCAAATTTGTCAACTGGAACCTCCATACTATGAAG TCCTTTTTAATTCCTAT
• Tissue: pods
• Gene name: LI_gene_159685;
• Additional information: details;

Expression of Ll_transcript_302640

FPKM

• PAB: 0.6
• PNAB: 4.9
• PS1: 5.6
• PS2: 3.3
• PS3: 4.3
• PW1: 3.9
• PW2: 3.2
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_302640

• Blastp: General transcription factor 3C polypeptide 2 from Homo with 27.22% of identity
• Blastx: General transcription factor 3C polypeptide 2 from Mus with 31.63% of identity
• Eggnog: General transcription factor IIIC, polypeptide 2, beta 110kDa(ENOG410YFGF)
• Kegg: Link to kegg annotations (2976)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427890.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;