| Id Trinity | TRINITY_DN48278_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_304074 |
| Sequence | AAAAAGGAGAAATAGCCAAAATAAAACCCTAACATTCCAACACCCTTTTCTCAGCCAACATGGCACTCTTTCTCCACCACAGAGCCACCGTCAAATTCAA ACCTTCTCTCCTCCACCGCCTCCTCTCCACCTCCGGCGATCAACCTCCCTCAGATTCCAACTCTCCATTCTCTTCCGTTTTACGTGACATCAAACATTCT CCCTAACATTCCAAAACCCTTTTCTCAGCCACCATGGCACTCTTTCTCCACCACAGAGCCACCGTCAAATTCAAACCTTCTCTCCTCCACCGCCTCCTCT CCACCTCCGGCGATCAACCTCCCTCAGATTCCAACTCTCCATTCTCTTCCGTTTTACGTGACATCAAACATTCTCTCAAACAACAAAACCAATCCTCTTC CTCTTCCTCTTCTCTTCAAGAAATCCAACGCAACCTCTCCGAGTTCCGCCGCCGCACCTCCGCCACTCCTCCAAACTCCGGCCAGATCTCCTTCCAAGAA CTCTATAAGCGTAGCCTCGCTCAAAACCCCGATGATGAGTCATCGTCGCCACCAACCGCAACCGGCGTTGGGAATCTCGATTTGAACAGCGCCAAGCCTA GTCGCGGTCCGGTTGGCTTCGACGCGATTCGCGAGAGCTTGCGGCAGATGAAGGCTGATGGCAAGGGAGGGGATCGAATGTCATTGCCTGCTTACAGAGA TGTGTTGAAATCGAGGCCTTCGGCGTCGTCGTCGAAGGTTTTCGGAGGAACGAGCGAGTTACCGGAGTCTGTTTTTGGACCGGAGTTAAGGGGGAGGTTG AGGAAGGATGATTCATCGGTGGCGGCGGCGATGAGGATGGAGTTTGTGAAGGTGTATGGGGCAGAGGAATTGGGAGAGAAATTGAGGAAGCTGAGGCCAG AGAGAAAAGAGAAGGATTGGTTTTCAATCAAGGAGTTGAATGAGAGGTTGATTAAGTTGAGGGAAATTGAGGAGAAGGAAGCTCGTTCTACAGTTAAAGG GGTTGACTATAATGATTTGAGAGAGAGCTTGCTTCGTGTAGTGTATGACAAAGACAATGCAAAGAAAAATTCAGTACAGAGAATGGAAATCTTGAACCAG ATTGGTGGCGCTCCAGAGTACTTGATGGGGCCTCCTAAAGAGCATCTTGTTGAAAAATACTTCCATCCGGATAATATGTCTTCGGCGGAAAAGTTGAAAA TTGAGCTCACAAAGGTTAGGGATGAGTTTAAAATGTCGGAGTCAGATTGTGGATCAGCTCGTGTTCAAGTTGCACTACTCACAACCAAGATTAAGCATCT ATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGTAAAGGTCTGATAGCAATGGTTCAGAAGAGAAAGAAGTTACTTAAGTACCTGAGAAGAACTGAC TGGGATTCCTATTGTTTGGTTATTTCTAAGCTTAATCTACGTGATAATCCAGAACATACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_159694; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304074
| Blastp | 30S ribosomal protein S15 from Aquifex with 54.67% of identity |
|---|---|
| Blastx | 30S ribosomal protein S15 from Pseudothermotoga with 52.44% of identity |
| Eggnog | Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity)(COG0184) |
| Kegg | Link to kegg annotations (aq_226a) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443361.1) |
| Pfam | Ribosomal protein S15 (PF00312.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |